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Cluster: HRGMv2_0265_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0265_10 HRGMv2_0265_10_33 39345 40616 + GH154
CAZyme HRGMv2_0265_10 HRGMv2_0265_10_34 40654 41781 + GH105
CAZyme HRGMv2_0265_10 HRGMv2_0265_10_35 41952 43796 + PL11_1
pfam HRGMv2_0265_10 HRGMv2_0265_10_36 43959 46784 - Laminin_G_3 | BNR_4 | aBig_2
pfam HRGMv2_0265_10 HRGMv2_0265_10_37 47038 49146 + Glyco_hyd_65N_2
CAZyme HRGMv2_0265_10 HRGMv2_0265_10_38 49331 52528 + GH2
CAZyme HRGMv2_0265_10 HRGMv2_0265_10_39 52537 54495 + GH51_2
NULL(UNKNOWN) HRGMv2_0265_10 HRGMv2_0265_10_40 54652 54858 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0265_10 HRGMv2_0265_10_41 55578 57245 + 2.A.81.1.2
CAZyme HRGMv2_0265_10 HRGMv2_0265_10_42 57286 60114 - GH43_4
Gene ID: HRGMv2_0265_10_33
Type: CAZyme
Location: 39345 - 40616 (+)
Gene ID: HRGMv2_0265_10_34
Type: CAZyme
Location: 40654 - 41781 (+)
Gene ID: HRGMv2_0265_10_35
Type: CAZyme
Location: 41952 - 43796 (+)
Gene ID: HRGMv2_0265_10_36
Type: pfam
Location: 43959 - 46784 (-)
Gene ID: HRGMv2_0265_10_37
Type: pfam
Location: 47038 - 49146 (+)
Gene ID: HRGMv2_0265_10_38
Type: CAZyme
Location: 49331 - 52528 (+)
Gene ID: HRGMv2_0265_10_39
Type: CAZyme
Location: 52537 - 54495 (+)
Gene ID: HRGMv2_0265_10_40
Type:
Location: 54652 - 54858 (+)
Gene ID: HRGMv2_0265_10_41
Type: TC
Location: 55578 - 57245 (+)
Gene ID: HRGMv2_0265_10_42
Type: CAZyme
Location: 57286 - 60114 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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