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Cluster: HRGMv2_0265_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0265_8 HRGMv2_0265_8_31 35435 37024 - 8.A.46.1.1
TC HRGMv2_0265_8 HRGMv2_0265_8_32 37070 40138 - 1.B.14.6.1
TF HRGMv2_0265_8 HRGMv2_0265_8_33 40467 41468 + LacI
TC HRGMv2_0265_8 HRGMv2_0265_8_34 41502 42827 + 2.A.2.6.2
TC HRGMv2_0265_8 HRGMv2_0265_8_35 42852 43475 + 9.B.196.1.2
CAZyme HRGMv2_0265_8 HRGMv2_0265_8_36 43709 46444 + GH77
CAZyme HRGMv2_0265_8 HRGMv2_0265_8_37 46554 48689 + GH97
CAZyme HRGMv2_0265_8 HRGMv2_0265_8_38 48713 50644 + GH13_14
CAZyme HRGMv2_0265_8 HRGMv2_0265_8_39 50652 52568 + GH13_46
CAZyme HRGMv2_0265_8 HRGMv2_0265_8_40 53441 56035 + PL11_1
pfam HRGMv2_0265_8 HRGMv2_0265_8_41 56194 56538 + TM1506
TC HRGMv2_0265_8 HRGMv2_0265_8_42 56909 58618 - 2.A.58.2.2
Gene ID: HRGMv2_0265_8_31
Type: TC
Location: 35435 - 37024 (-)
Gene ID: HRGMv2_0265_8_32
Type: TC
Location: 37070 - 40138 (-)
Gene ID: HRGMv2_0265_8_33
Type: TF
Location: 40467 - 41468 (+)
Gene ID: HRGMv2_0265_8_34
Type: TC
Location: 41502 - 42827 (+)
Gene ID: HRGMv2_0265_8_35
Type: TC
Location: 42852 - 43475 (+)
Gene ID: HRGMv2_0265_8_36
Type: CAZyme
Location: 43709 - 46444 (+)
Gene ID: HRGMv2_0265_8_37
Type: CAZyme
Location: 46554 - 48689 (+)
Gene ID: HRGMv2_0265_8_38
Type: CAZyme
Location: 48713 - 50644 (+)
Gene ID: HRGMv2_0265_8_39
Type: CAZyme
Location: 50652 - 52568 (+)
Gene ID: HRGMv2_0265_8_40
Type: CAZyme
Location: 53441 - 56035 (+)
Gene ID: HRGMv2_0265_8_41
Type: pfam
Location: 56194 - 56538 (+)
Gene ID: HRGMv2_0265_8_42
Type: TC
Location: 56909 - 58618 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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