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Cluster: HRGMv2_0265_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0265_8 HRGMv2_0265_8_1 139 2112 + 3.A.3.6.5
TF HRGMv2_0265_8 HRGMv2_0265_8_2 2147 2659 - FUR
pfam HRGMv2_0265_8 HRGMv2_0265_8_3 2728 3096 + DUF6769
TC HRGMv2_0265_8 HRGMv2_0265_8_4 3218 4360 + 2.A.6.1.15
TC HRGMv2_0265_8 HRGMv2_0265_8_5 4373 7459 + 2.A.6.1.5
pfam HRGMv2_0265_8 HRGMv2_0265_8_6 7639 8817 + OEP | OEP
TC HRGMv2_0265_8 HRGMv2_0265_8_7 8943 9338 + 1.E.14.1.13
TC HRGMv2_0265_8 HRGMv2_0265_8_8 9331 10023 + 2.A.122.1.1
CAZyme HRGMv2_0265_8 HRGMv2_0265_8_9 10165 11409 + GH53
Gene ID: HRGMv2_0265_8_1
Type: TC
Location: 139 - 2112 (+)
Gene ID: HRGMv2_0265_8_2
Type: TF
Location: 2147 - 2659 (-)
Gene ID: HRGMv2_0265_8_3
Type: pfam
Location: 2728 - 3096 (+)
Gene ID: HRGMv2_0265_8_4
Type: TC
Location: 3218 - 4360 (+)
Gene ID: HRGMv2_0265_8_5
Type: TC
Location: 4373 - 7459 (+)
Gene ID: HRGMv2_0265_8_6
Type: pfam
Location: 7639 - 8817 (+)
Gene ID: HRGMv2_0265_8_7
Type: TC
Location: 8943 - 9338 (+)
Gene ID: HRGMv2_0265_8_8
Type: TC
Location: 9331 - 10023 (+)
Gene ID: HRGMv2_0265_8_9
Type: CAZyme
Location: 10165 - 11409 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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