Cluster: HRGMv2_0262_CGC6
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0262
- CGC Family ID: CGCFAM_00006
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0262_6 | HRGMv2_0262_6_10 | 9572 | 10861 | + | 2.A.1.7.2 |
| TC | HRGMv2_0262_6 | HRGMv2_0262_6_11 | 11520 | 12326 | + | 1.B.18.3.3 |
| TC | HRGMv2_0262_6 | HRGMv2_0262_6_12 | 12433 | 14763 | + | 8.A.3.3.4 |
| TC | HRGMv2_0262_6 | HRGMv2_0262_6_13 | 14792 | 16252 | + | 2.A.66.2.23 |
| NULL(UNKNOWN) | HRGMv2_0262_6 | HRGMv2_0262_6_14 | 16249 | 17763 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0262_6 | HRGMv2_0262_6_15 | 17799 | 18347 | + | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_0262_6 | HRGMv2_0262_6_16 | 18360 | 19427 | + | GT4 |
| pfam | HRGMv2_0262_6 | HRGMv2_0262_6_17 | 19494 | 19922 | + | Hexapep | Hexapep_2 | Hexapep_2 |
| CAZyme | HRGMv2_0262_6 | HRGMv2_0262_6_18 | 20110 | 21150 | + | GT4 |
| NULL(UNKNOWN) | HRGMv2_0262_6 | HRGMv2_0262_6_19 | 21316 | 22578 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0262_6 | HRGMv2_0262_6_20 | 22766 | 23848 | + | Acyl_transf_3 |
| TC | HRGMv2_0262_6 | HRGMv2_0262_6_21 | 23954 | 24589 | + | 3.A.8.1.1 |
Gene ID: HRGMv2_0262_6_10
Type: TC
Location: 9572 - 10861 (+)
Type: TC
Location: 9572 - 10861 (+)
Gene ID: HRGMv2_0262_6_11
Type: TC
Location: 11520 - 12326 (+)
Type: TC
Location: 11520 - 12326 (+)
Gene ID: HRGMv2_0262_6_12
Type: TC
Location: 12433 - 14763 (+)
Type: TC
Location: 12433 - 14763 (+)
Gene ID: HRGMv2_0262_6_13
Type: TC
Location: 14792 - 16252 (+)
Type: TC
Location: 14792 - 16252 (+)
Gene ID: HRGMv2_0262_6_14
Type:
Location: 16249 - 17763 (+)
Type:
Location: 16249 - 17763 (+)
Gene ID: HRGMv2_0262_6_15
Type: pfam
Location: 17799 - 18347 (+)
Type: pfam
Location: 17799 - 18347 (+)
Gene ID: HRGMv2_0262_6_16
Type: CAZyme
Location: 18360 - 19427 (+)
Type: CAZyme
Location: 18360 - 19427 (+)
Gene ID: HRGMv2_0262_6_17
Type: pfam
Location: 19494 - 19922 (+)
Type: pfam
Location: 19494 - 19922 (+)
Gene ID: HRGMv2_0262_6_18
Type: CAZyme
Location: 20110 - 21150 (+)
Type: CAZyme
Location: 20110 - 21150 (+)
Gene ID: HRGMv2_0262_6_19
Type:
Location: 21316 - 22578 (+)
Type:
Location: 21316 - 22578 (+)
Gene ID: HRGMv2_0262_6_20
Type: pfam
Location: 22766 - 23848 (+)
Type: pfam
Location: 22766 - 23848 (+)
Gene ID: HRGMv2_0262_6_21
Type: TC
Location: 23954 - 24589 (+)
Type: TC
Location: 23954 - 24589 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
CAG-873
Species
CAG-873 sp900540625
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.