PROTEIN: HRGMv2_0262_6_19
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Protein File & Metadata
Source:
HRGMv2_0262_6_19.pdb
Genome ID:
Protein ID:
HRGMv2_0262_6_19
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Protein Sequence
MDLKIIKTEH IRSLLAHWPG IARTQRQLLA DFDPILLEKA VKRAIRDVPF YKDYAQYIND 60 GIFDITRFPI IRKPDIKGHT EELVSKKIPK CFRVMKRTAG STGIPLDVYY SPRLFIEKDL 120 IVRHLFSLFG KGQRIALLRD HTSTGEIIES TGAKHWLLSP YFLSPQNLDK YLDLLQQLHI 180 NTLHVYPSAI TILARLIKDK YGTCPVKGIR GIFASSESFD KDEKKIVKEV FPEARLIDFY 240 GHNELACNAS AEDFGSFHFY MNFGYVEFLP TGDTLPNGNI ICEIVATSIL NRTMPLIRYG 300 TQDCVEMDKD GNIVSIYGRT SDFIVTKQGD VVPCLFLTRP SSTLNVINRQ YYQPEPGKLI 360 TRVVVNDKYT EADRISMLED MQRSFKDKMD CDVVIVPSIE RGGRSKQKRL VQDVDIHLYR 420
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-Q8DPX2-F1-model_v4 | 1 | 412 | 35 | 436 | 0.6141 |
0.6672 |
| AF-A0A3P7DB79-F1-model_v4 | 1 | 416 | 13 | 421 | 0.5954 |
0.6322 |
| AF-A0A0H3GS56-F1-model_v4 | 22 | 419 | 6 | 426 | 0.5911 |
0.6516 |
| AF-P76085-F1-model_v4 | 22 | 419 | 6 | 427 | 0.5902 |
0.6496 |
| AF-K0EUZ6-F1-model_v4 | 1 | 415 | 10 | 466 | 0.5811 |
0.6366 |
| AF-A0A077ZIV7-F1-model_v4 | 1 | 418 | 13 | 411 | 0.5788 |
0.64 |
| AF-A0A0H3GRA0-F1-model_v4 | 1 | 418 | 5 | 423 | 0.5778 |
0.6078 |
| AF-X8F207-F1-model_v4 | 1 | 415 | 1 | 419 | 0.5759 |
0.607 |
| AF-H2KZ58-F1-model_v4 | 8 | 414 | 4 | 461 | 0.5748 |
0.6347 |
| AF-A0A175VY11-F1-model_v4 | 95 | 415 | 1 | 352 | 0.5699 |
0.7004 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A387B7M2-F1-model_v4 | GT2 | 5 | 420 | 287 | 731 | 0.6367 |
0.8257 |
| AF-A0A6G7YF71-F1-model_v4 | GT2 | 5 | 420 | 284 | 726 | 0.6319 |
0.8148 |
| AF-S4Y6L4-F1-model_v4 | GT2 | 6 | 420 | 287 | 730 | 0.6257 |
0.8164 |
| AF-A9FBI0-F1-model_v4 | GT2 | 5 | 420 | 287 | 730 | 0.6219 |
0.8097 |
| AF-A0A4P7XK67-F1-model_v4 | GT4 | 9 | 419 | 388 | 821 | 0.6206 |
0.8426 |
| AF-A0A4P2QA51-F1-model_v4 | GT2 | 6 | 420 | 287 | 732 | 0.6165 |
0.8135 |
| AF-A0A0K1EPJ6-F1-model_v4 | GT2 | 5 | 420 | 345 | 798 | 0.6111 |
0.8133 |
| A0A915XJC2 | GT2 | 7 | 420 | 10 | 446 | 0.6071 |
0.7988 |
| AF-W0V5W2-F1-model_v4 | GT4 | 9 | 420 | 384 | 819 | 0.5982 |
0.81 |
| AF-A0A4Y6RAD8-F1-model_v4 | GT4 | 9 | 419 | 378 | 811 | 0.5979 |
0.8086 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A387B7M2 | GT2 | 5 | 420 | 287 | 731 | 0.6367 |
0.8257 |
| A0A4P7XK67 | GT4 | 9 | 419 | 388 | 821 | 0.6206 |
0.8426 |
| A0A0K1EPJ6 | GT2 | 5 | 420 | 345 | 798 | 0.6111 |
0.8133 |
| A0A915XJC2 | GT2 | 7 | 420 | 10 | 446 | 0.6071 |
0.7988 |
| A0A1Y0I9L4 | GT4 | 8 | 419 | 413 | 847 | 0.5886 |
0.8051 |
| USX17773.1 | GT4 | 9 | 420 | 400 | 835 | 0.5806 |
0.7906 |
| AZD55811.1 | GT2 | 30 | 389 | 353 | 677 | 0.4431 |
0.692 |
| A0A9Q8SUF1 | GT32 | 1 | 414 | 972 | 1477 | 0.4021 |
0.6385 |
| A0A8S2AZU5 | GH1 | 21 | 395 | 586 | 1224 | 0.3732 |
0.6128 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2y27-assembly1.cif.gz_A | 22 | 415 | 1 | 425 | 0.7287 |
0.7974 |
| 2y4n-assembly1.cif.gz_B | 22 | 414 | 2 | 423 | 0.7238 |
0.7915 |
| 2y4n-assembly1.cif.gz_A | 22 | 415 | 3 | 426 | 0.7235 |
0.7919 |
| 4rvo-assembly1.cif.gz_B | 22 | 414 | 4 | 428 | 0.7199 |
0.7927 |
| 4r1l-assembly3.cif.gz_B | 22 | 414 | 3 | 422 | 0.7187 |
0.7867 |
| 4rvn-assembly1.cif.gz_B | 22 | 414 | 4 | 424 | 0.7182 |
0.7879 |
| 4r1m-assembly1.cif.gz_B | 22 | 414 | 4 | 426 | 0.7151 |
0.7861 |
| 4rvo-assembly2.cif.gz_D | 22 | 415 | 5 | 428 | 0.7132 |
0.784 |
| 4r1m-assembly2.cif.gz_D | 22 | 418 | 5 | 428 | 0.7109 |
0.7751 |
| 4rvn-assembly2.cif.gz_D | 22 | 418 | 5 | 426 | 0.7104 |
0.7741 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P39860-F1-model_v4 | 1 | 420 | 2 | 449 | 0.8027 |
0.8477 |
| AF-O33469-F1-model_v4 | 24 | 416 | 12 | 438 | 0.7186 |
0.7992 |
| AF-Q72K16-F1-model_v4 | 22 | 415 | 3 | 445 | 0.7174 |
0.8007 |
| AF-E2JA32-F1-model_v4 | 23 | 416 | 1 | 396 | 0.7059 |
0.7496 |
| AF-A0A345BJN3-F1-model_v4 | 97 | 414 | 1 | 330 | 0.608 |
0.7352 |
| AF-P76085-F1-model_v4 | 22 | 419 | 6 | 427 | 0.5902 |
0.6496 |
| AF-Q9L9C1-F1-model_v4 | 22 | 419 | 9 | 432 | 0.5896 |
0.651 |
| AF-C3P4I7-F1-model_v4 | 1 | 414 | 56 | 499 | 0.5689 |
0.6416 |
| AF-C3LAH8-F1-model_v4 | 1 | 414 | 56 | 499 | 0.5689 |
0.6416 |
| AF-Q81T97-F1-model_v4 | 1 | 414 | 56 | 499 | 0.5688 |
0.6419 |