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Cluster: HRGMv2_0258_CGC99

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0258_28 HRGMv2_0258_28_30 44602 47121 - CE17
sulfatase HRGMv2_0258_28 HRGMv2_0258_28_31 47189 48205 - S1_16
TC HRGMv2_0258_28 HRGMv2_0258_28_32 48227 49480 - 2.A.1.7.1
pfam HRGMv2_0258_28 HRGMv2_0258_28_33 49503 50426 - Amidohydro_2
TC HRGMv2_0258_28 HRGMv2_0258_28_34 50460 51362 - 8.A.5.1.6
TF HRGMv2_0258_28 HRGMv2_0258_28_35 51608 52648 + LacI
TF HRGMv2_0258_28 HRGMv2_0258_28_36 52614 56756 - HTH_AraC
TC HRGMv2_0258_28 HRGMv2_0258_28_37 56823 58262 + 2.A.1.14.25
Gene ID: HRGMv2_0258_28_30
Type: CAZyme
Location: 44602 - 47121 (-)
Gene ID: HRGMv2_0258_28_31
Type: sulfatase
Location: 47189 - 48205 (-)
Gene ID: HRGMv2_0258_28_32
Type: TC
Location: 48227 - 49480 (-)
Gene ID: HRGMv2_0258_28_33
Type: pfam
Location: 49503 - 50426 (-)
Gene ID: HRGMv2_0258_28_34
Type: TC
Location: 50460 - 51362 (-)
Gene ID: HRGMv2_0258_28_35
Type: TF
Location: 51608 - 52648 (+)
Gene ID: HRGMv2_0258_28_36
Type: TF
Location: 52614 - 56756 (-)
Gene ID: HRGMv2_0258_28_37
Type: TC
Location: 56823 - 58262 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0258_28_30 vegetarian > omnivore 2.06689 0.01449
HRGMv2_0258_28_30 vegetarian > vegan 1.12244 0.01710
HRGMv2_0258_28_35 vegetarian > vegan 1.61191 0.01710

🧭 Explore Read Mapping of CGC

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