Cluster: HRGMv2_0258_CGC92
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0258
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0258_25 | HRGMv2_0258_25_66 | 87599 | 90277 | - | 1.B.14.6.12 |
| STP | HRGMv2_0258_25 | HRGMv2_0258_25_67 | 90336 | 90923 | - | Sigma70_r2 | Sigma70_r4_2 |
| STP | HRGMv2_0258_25 | HRGMv2_0258_25_68 | 91031 | 92029 | + | FecR |
| TC | HRGMv2_0258_25 | HRGMv2_0258_25_69 | 92182 | 95832 | + | 1.B.14.6.1 |
| TC | HRGMv2_0258_25 | HRGMv2_0258_25_70 | 95859 | 97412 | + | 8.A.46.1.4 |
| CAZyme | HRGMv2_0258_25 | HRGMv2_0258_25_71 | 97522 | 99138 | + | GH156 |
| CAZyme | HRGMv2_0258_25 | HRGMv2_0258_25_72 | 99107 | 102772 | + | GH106 |
Gene ID: HRGMv2_0258_25_66
Type: TC
Location: 87599 - 90277 (-)
Type: TC
Location: 87599 - 90277 (-)
Gene ID: HRGMv2_0258_25_67
Type: STP
Location: 90336 - 90923 (-)
Type: STP
Location: 90336 - 90923 (-)
Gene ID: HRGMv2_0258_25_68
Type: STP
Location: 91031 - 92029 (+)
Type: STP
Location: 91031 - 92029 (+)
Gene ID: HRGMv2_0258_25_69
Type: TC
Location: 92182 - 95832 (+)
Type: TC
Location: 92182 - 95832 (+)
Gene ID: HRGMv2_0258_25_70
Type: TC
Location: 95859 - 97412 (+)
Type: TC
Location: 95859 - 97412 (+)
Gene ID: HRGMv2_0258_25_71
Type: CAZyme
Location: 97522 - 99138 (+)
Type: CAZyme
Location: 97522 - 99138 (+)
Gene ID: HRGMv2_0258_25_72
Type: CAZyme
Location: 99107 - 102772 (+)
Type: CAZyme
Location: 99107 - 102772 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides goldsteinii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.