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Cluster: HRGMv2_0258_CGC84

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0258_22 HRGMv2_0258_22_2 775 3093 - GH163
pfam HRGMv2_0258_22 HRGMv2_0258_22_3 3370 4743 - DUF3863 | DUF3864
CAZyme HRGMv2_0258_22 HRGMv2_0258_22_4 4850 7411 - GH84
NULL(UNKNOWN) HRGMv2_0258_22 HRGMv2_0258_22_5 7509 8786 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0258_22 HRGMv2_0258_22_6 8800 11877 - GH106
pfam HRGMv2_0258_22 HRGMv2_0258_22_7 11967 13778 - SusD_RagB | SusD-like_3
pfam HRGMv2_0258_22 HRGMv2_0258_22_8 13798 15312 - TonB_dep_Rec_b-barrel
TC HRGMv2_0258_22 HRGMv2_0258_22_9 15328 17208 - 1.B.14.6.1
Gene ID: HRGMv2_0258_22_2
Type: CAZyme
Location: 775 - 3093 (-)
Gene ID: HRGMv2_0258_22_3
Type: pfam
Location: 3370 - 4743 (-)
Gene ID: HRGMv2_0258_22_4
Type: CAZyme
Location: 4850 - 7411 (-)
Gene ID: HRGMv2_0258_22_5
Type:
Location: 7509 - 8786 (-)
Gene ID: HRGMv2_0258_22_6
Type: CAZyme
Location: 8800 - 11877 (-)
Gene ID: HRGMv2_0258_22_7
Type: pfam
Location: 11967 - 13778 (-)
Gene ID: HRGMv2_0258_22_8
Type: pfam
Location: 13798 - 15312 (-)
Gene ID: HRGMv2_0258_22_9
Type: TC
Location: 15328 - 17208 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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