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Cluster: HRGMv2_0258_CGC70

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0258_17 HRGMv2_0258_17_78 89264 90025 - 9.B.196.1.2
pfam HRGMv2_0258_17 HRGMv2_0258_17_79 90139 90972 + NlpE
TC HRGMv2_0258_17 HRGMv2_0258_17_80 91102 93288 + 2.A.21.9.2
CAZyme HRGMv2_0258_17 HRGMv2_0258_17_81 93327 95153 - GH110
TC HRGMv2_0258_17 HRGMv2_0258_17_82 95264 97234 + 3.A.3.6.10
Gene ID: HRGMv2_0258_17_78
Type: TC
Location: 89264 - 90025 (-)
Gene ID: HRGMv2_0258_17_79
Type: pfam
Location: 90139 - 90972 (+)
Gene ID: HRGMv2_0258_17_80
Type: TC
Location: 91102 - 93288 (+)
Gene ID: HRGMv2_0258_17_81
Type: CAZyme
Location: 93327 - 95153 (-)
Gene ID: HRGMv2_0258_17_82
Type: TC
Location: 95264 - 97234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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