Cluster: HRGMv2_0258_CGC48
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0258
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0258_9 | HRGMv2_0258_9_138 | 204236 | 207442 | + | 1.B.14.6.1 |
| pfam | HRGMv2_0258_9 | HRGMv2_0258_9_139 | 207456 | 209324 | + | SusD_RagB | SusD-like_3 |
| pfam | HRGMv2_0258_9 | HRGMv2_0258_9_140 | 209499 | 210665 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | GFO_IDH_MocA_C3 |
| CAZyme | HRGMv2_0258_9 | HRGMv2_0258_9_141 | 210695 | 213793 | + | GH2 |
| TC | HRGMv2_0258_9 | HRGMv2_0258_9_142 | 213952 | 215535 | + | 9.A.25.1.1 |
| CAZyme | HRGMv2_0258_9 | HRGMv2_0258_9_143 | 215583 | 216971 | + | GH177 |
Gene ID: HRGMv2_0258_9_138
Type: TC
Location: 204236 - 207442 (+)
Type: TC
Location: 204236 - 207442 (+)
Gene ID: HRGMv2_0258_9_139
Type: pfam
Location: 207456 - 209324 (+)
Type: pfam
Location: 207456 - 209324 (+)
Gene ID: HRGMv2_0258_9_140
Type: pfam
Location: 209499 - 210665 (+)
Type: pfam
Location: 209499 - 210665 (+)
Gene ID: HRGMv2_0258_9_141
Type: CAZyme
Location: 210695 - 213793 (+)
Type: CAZyme
Location: 210695 - 213793 (+)
Gene ID: HRGMv2_0258_9_142
Type: TC
Location: 213952 - 215535 (+)
Type: TC
Location: 213952 - 215535 (+)
Gene ID: HRGMv2_0258_9_143
Type: CAZyme
Location: 215583 - 216971 (+)
Type: CAZyme
Location: 215583 - 216971 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides goldsteinii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.