Cluster: HRGMv2_0258_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0258
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0258_6 | HRGMv2_0258_6_71 | 104304 | 104993 | + | 3.A.1.147.6 |
| CAZyme | HRGMv2_0258_6 | HRGMv2_0258_6_72 | 105078 | 107225 | - | GH92 |
| CAZyme | HRGMv2_0258_6 | HRGMv2_0258_6_73 | 107303 | 108427 | - | GH76 |
| pfam | HRGMv2_0258_6 | HRGMv2_0258_6_74 | 108528 | 109667 | - | SusE |
| pfam | HRGMv2_0258_6 | HRGMv2_0258_6_75 | 109680 | 110807 | - | SusE |
| TC | HRGMv2_0258_6 | HRGMv2_0258_6_76 | 110840 | 112462 | - | 8.A.46.1.4 |
| TC | HRGMv2_0258_6 | HRGMv2_0258_6_77 | 112478 | 115828 | - | 1.B.14.6.1 |
Gene ID: HRGMv2_0258_6_71
Type: TC
Location: 104304 - 104993 (+)
Type: TC
Location: 104304 - 104993 (+)
Gene ID: HRGMv2_0258_6_72
Type: CAZyme
Location: 105078 - 107225 (-)
Type: CAZyme
Location: 105078 - 107225 (-)
Gene ID: HRGMv2_0258_6_73
Type: CAZyme
Location: 107303 - 108427 (-)
Type: CAZyme
Location: 107303 - 108427 (-)
Gene ID: HRGMv2_0258_6_74
Type: pfam
Location: 108528 - 109667 (-)
Type: pfam
Location: 108528 - 109667 (-)
Gene ID: HRGMv2_0258_6_75
Type: pfam
Location: 109680 - 110807 (-)
Type: pfam
Location: 109680 - 110807 (-)
Gene ID: HRGMv2_0258_6_76
Type: TC
Location: 110840 - 112462 (-)
Type: TC
Location: 110840 - 112462 (-)
Gene ID: HRGMv2_0258_6_77
Type: TC
Location: 112478 - 115828 (-)
Type: TC
Location: 112478 - 115828 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Species
Parabacteroides goldsteinii
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.