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Cluster: HRGMv2_0252_CGC37

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0252_34 HRGMv2_0252_34_3 2455 5316 + GH106
CAZyme HRGMv2_0252_34 HRGMv2_0252_34_4 5316 6815 + GH28
NULL(UNKNOWN) HRGMv2_0252_34 HRGMv2_0252_34_5 6812 7375 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0252_34 HRGMv2_0252_34_6 7388 9367 + CE20 | CE20
CAZyme HRGMv2_0252_34 HRGMv2_0252_34_7 9380 11671 + GH3
CAZyme HRGMv2_0252_34 HRGMv2_0252_34_8 11685 13436 + GH127
CAZyme HRGMv2_0252_34 HRGMv2_0252_34_9 13524 15959 - GH31
pfam HRGMv2_0252_34 HRGMv2_0252_34_10 16147 17517 - Big_2 | Big_2
pfam HRGMv2_0252_34 HRGMv2_0252_34_11 17537 19216 - SusD_RagB
TC HRGMv2_0252_34 HRGMv2_0252_34_12 19230 22802 - 1.B.14.6.1
Gene ID: HRGMv2_0252_34_3
Type: CAZyme
Location: 2455 - 5316 (+)
Gene ID: HRGMv2_0252_34_4
Type: CAZyme
Location: 5316 - 6815 (+)
Gene ID: HRGMv2_0252_34_5
Type:
Location: 6812 - 7375 (+)
Gene ID: HRGMv2_0252_34_6
Type: CAZyme
Location: 7388 - 9367 (+)
Gene ID: HRGMv2_0252_34_7
Type: CAZyme
Location: 9380 - 11671 (+)
Gene ID: HRGMv2_0252_34_8
Type: CAZyme
Location: 11685 - 13436 (+)
Gene ID: HRGMv2_0252_34_9
Type: CAZyme
Location: 13524 - 15959 (-)
Gene ID: HRGMv2_0252_34_10
Type: pfam
Location: 16147 - 17517 (-)
Gene ID: HRGMv2_0252_34_11
Type: pfam
Location: 17537 - 19216 (-)
Gene ID: HRGMv2_0252_34_12
Type: TC
Location: 19230 - 22802 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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