PROTEIN: HRGMv2_0252_34_5
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Protein File & Metadata
Source:
HRGMv2_0252_34_5.pdb
Genome ID:
Protein ID:
HRGMv2_0252_34_5
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Protein Sequence
MKRILIMAII SLVSLQGFAQ KPVYKASKFS IRSDGKQDNT TSIQGAIDYI AANGGGTLEF 60 SVGRYLTGAV ELKSGVNIKL LEGAIIVGST NIYSYKGHPG IFWAEGQRNI LIDGHGVFDG 120 RGAELRENEK AQKSLGHIPE NNAVPALMSF KDCEGIVVKG VILRNSAAEI PILSGKAGIE 180 VQNVSIE 187
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A0A1D6I6Y0-F1-model_v4 | 1 | 187 | 5 | 210 | 0.6295 |
0.9079 |
| AF-Q9SJN7-F1-model_v4 | 2 | 187 | 1 | 193 | 0.6047 |
0.8419 |
| AF-F4IIG2-F1-model_v4 | 1 | 187 | 1 | 193 | 0.5982 |
0.8288 |
| AF-O48729-F1-model_v4 | 2 | 187 | 1 | 193 | 0.5942 |
0.8263 |
| AF-I1N942-F1-model_v4 | 6 | 187 | 14 | 206 | 0.592 |
0.8754 |
| AF-K7L394-F1-model_v4 | 10 | 187 | 19 | 194 | 0.5916 |
0.8127 |
| AF-A0A0P0XNS4-F1-model_v4 | 13 | 187 | 16 | 201 | 0.5871 |
0.897 |
| AF-Q0IMQ3-F1-model_v4 | 18 | 187 | 4 | 188 | 0.5868 |
0.9013 |
| AF-F4I650-F1-model_v4 | 4 | 187 | 11 | 194 | 0.5829 |
0.8172 |
| AF-Q9C8C4-F1-model_v4 | 4 | 187 | 4 | 193 | 0.5802 |
0.815 |
Structural Homologs -
CAZyme3D-Whole
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| AF-A0A1G4G5K9-F1-model_v4 | GH28 | 1 | 187 | 1 | 191 | 0.8231 |
0.9514 |
| AF-A0A3G9DTI7-F1-model_v4 | GH28 | 1 | 187 | 1 | 191 | 0.8164 |
0.9447 |
| AF-C6XU07-F1-model_v4 | GH28 | 5 | 187 | 1 | 191 | 0.8072 |
0.949 |
| AF-W0EZ76-F1-model_v4 | GH28 | 5 | 187 | 4 | 190 | 0.7995 |
0.9389 |
| AF-A7AB45-F1-model_v4 | GH28 | 4 | 187 | 6 | 193 | 0.7976 |
0.9382 |
| A0A3R6GMJ2 | GH28 | 4 | 187 | 6 | 193 | 0.7962 |
0.9366 |
| A0A2X2IYC4 | GH28 | 5 | 187 | 1 | 190 | 0.7957 |
0.9294 |
| AF-A0A5B5UHS5-F1-model_v4 | GH28 | 1 | 187 | 2 | 193 | 0.7859 |
0.9146 |
| AF-A0A5Q0QIQ8-F1-model_v4 | GH28 | 7 | 187 | 7 | 194 | 0.7796 |
0.9295 |
| AF-A0A0C5V5S5-F1-model_v4 | GH28 | 18 | 187 | 34 | 200 | 0.7741 |
0.9089 |
Structural Homologs -
CAZyme-ID50
| Target | CAZyme Family | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|---|
| A0A3G9DTI7 | GH28 | 1 | 187 | 1 | 191 | 0.8164 |
0.9447 |
| C6XU07 | GH28 | 5 | 187 | 1 | 191 | 0.8072 |
0.949 |
| W0EZ76 | GH28 | 5 | 187 | 4 | 190 | 0.7995 |
0.9389 |
| A0A3R6GMJ2 | GH28 | 4 | 187 | 6 | 193 | 0.7962 |
0.9366 |
| A0A2X2IYC4 | GH28 | 5 | 187 | 1 | 190 | 0.7957 |
0.9294 |
| A0A5B5UHS5 | GH28 | 1 | 187 | 2 | 193 | 0.7859 |
0.9146 |
| A0A5Q0QIQ8 | GH28 | 7 | 187 | 7 | 194 | 0.7796 |
0.9295 |
| A0A0C5V5S5 | GH28 | 18 | 187 | 34 | 200 | 0.7741 |
0.9089 |
| A0A5P2FYX4 | GH28 | 1 | 182 | 1 | 208 | 0.7493 |
0.8323 |
| A0A1V0QE95 | GH28 | 18 | 181 | 8 | 225 | 0.7154 |
0.9017 |
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 4mxn-assembly3.cif.gz_C | 21 | 187 | 1 | 172 | 0.7913 |
0.9723 |
| 4mxn-assembly2.cif.gz_B | 22 | 187 | 1 | 169 | 0.7863 |
0.9773 |
| 4mxn-assembly4.cif.gz_D | 22 | 187 | 1 | 167 | 0.7828 |
0.9694 |
| 3jur-assembly1.cif.gz_D | 18 | 187 | 20 | 230 | 0.5674 |
0.8846 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-A7PZL3-F1-model_v4 | 18 | 187 | 57 | 241 | 0.561 |
0.899 |
| AF-P35338-F1-model_v4 | 16 | 187 | 33 | 203 | 0.56 |
0.8465 |
| AF-O22818-F1-model_v4 | 8 | 187 | 14 | 195 | 0.5599 |
0.8035 |
| AF-P26216-F1-model_v4 | 19 | 187 | 36 | 203 | 0.5554 |
0.8539 |
| AF-P15922-F1-model_v4 | 15 | 187 | 120 | 366 | 0.5543 |
0.9206 |
| AF-P49062-F1-model_v4 | 15 | 187 | 43 | 211 | 0.5519 |
0.8511 |