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Cluster: HRGMv2_0252_CGC32

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0252_25 HRGMv2_0252_25_17 17880 19385 - 2.A.1.4.3
NULL(UNKNOWN) HRGMv2_0252_25 HRGMv2_0252_25_18 19505 20980 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0252_25 HRGMv2_0252_25_19 21099 23276 + UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2
CAZyme HRGMv2_0252_25 HRGMv2_0252_25_20 23295 25265 + GH13_8
CAZyme HRGMv2_0252_25 HRGMv2_0252_25_21 25288 27225 + GH133
CAZyme HRGMv2_0252_25 HRGMv2_0252_25_22 27222 28517 + GT4
CAZyme HRGMv2_0252_25 HRGMv2_0252_25_23 28524 30047 + GH57
CAZyme HRGMv2_0252_25 HRGMv2_0252_25_24 30044 34282 + GT3 | GT35
pfam HRGMv2_0252_25 HRGMv2_0252_25_25 34273 35145 + Flavokinase | FAD_syn
NULL(UNKNOWN) HRGMv2_0252_25 HRGMv2_0252_25_26 35412 35660 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0252_25 HRGMv2_0252_25_27 35662 36984 - GH177
Gene ID: HRGMv2_0252_25_17
Type: TC
Location: 17880 - 19385 (-)
Gene ID: HRGMv2_0252_25_18
Type:
Location: 19505 - 20980 (+)
Gene ID: HRGMv2_0252_25_19
Type: pfam
Location: 21099 - 23276 (+)
Gene ID: HRGMv2_0252_25_20
Type: CAZyme
Location: 23295 - 25265 (+)
Gene ID: HRGMv2_0252_25_21
Type: CAZyme
Location: 25288 - 27225 (+)
Gene ID: HRGMv2_0252_25_22
Type: CAZyme
Location: 27222 - 28517 (+)
Gene ID: HRGMv2_0252_25_23
Type: CAZyme
Location: 28524 - 30047 (+)
Gene ID: HRGMv2_0252_25_24
Type: CAZyme
Location: 30044 - 34282 (+)
Gene ID: HRGMv2_0252_25_25
Type: pfam
Location: 34273 - 35145 (+)
Gene ID: HRGMv2_0252_25_26
Type:
Location: 35412 - 35660 (-)
Gene ID: HRGMv2_0252_25_27
Type: CAZyme
Location: 35662 - 36984 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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