PROTEIN: HRGMv2_0252_25_18
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Protein File & Metadata
Source:
HRGMv2_0252_25_18.pdb
Genome ID:
Protein ID:
HRGMv2_0252_25_18
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Protein Sequence
MKRLIIPVAL SLFAIPSFAG GYLTTTNQNT AFYRMPAHNA TIGTEGAYYD PAGIAFMKDG 60 WHVSLDIQSV WQRRHVNSTF APFAYRKGND GSNQRKYIGV TNVPVLPHMD LAFKKDRWFG 120 SFHFGPIAGG GSAKFSDGLG SFEANYAMLP VLVNRLAGSN VVTAYSSDIE FTGGQTYWGG 180 QFNFGYRVAP KLSVSIGARL VYATAAYDGS ISNIQLEMGG NMLPAATALT AMLTEAAKTN 240 PTIAALISSG KLDVNDIVGD RKVDVYQRGF GIAPIISVHY KPGKWDLAAR YEFNTSIRLK 300 NHTAENGDAG MSMFKDGKKL AGDVPALLAL GIQYNFSDRL RAQVGYNHFF EKQAKTYNST 360 TDSDDKQDLI KHHTFEILFG AEYDLSKTFT ISAGGHKTTF GWGDDYAFLS DMGFSTNSWS 420 FGLGTRMHLT EKLSADLAVY KTFYSHVTKN ISDYAATITR SLGALGVQPV PGSDKMTRLS 480 TCVGISLNYD F 491
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs -
AFDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43838-F1-model_v4 | 19 | 491 | 21 | 459 | 0.7615 |
0.8336 |
| AF-Q9I456-F1-model_v4 | 19 | 491 | 22 | 424 | 0.7503 |
0.856 |
| AF-P10384-F1-model_v4 | 19 | 491 | 24 | 446 | 0.7489 |
0.8369 |
| AF-Q8ZNA5-F1-model_v4 | 20 | 491 | 25 | 435 | 0.7466 |
0.8465 |
| AF-Q32DJ1-F1-model_v4 | 20 | 491 | 27 | 448 | 0.7464 |
0.8378 |
| AF-Q9HVJ6-F1-model_v4 | 19 | 491 | 19 | 463 | 0.7279 |
0.7896 |
| AF-Q9I2X5-F1-model_v4 | 20 | 491 | 25 | 532 | 0.6999 |
0.7684 |
| AF-Q0P7V2-F1-model_v4 | 8 | 490 | 770 | 1120 | 0.3461 |
0.6428 |
Structural Homologs - CAZyme3D-Whole
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs - CAZyme-ID50
No structural homologs were found using the cutoff E-value 1e-5 and TM-score threshold > 0.45.
Structural Homologs -
PDB
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| 2r4o-assembly2.cif.gz_B | 21 | 491 | 1 | 421 | 0.7724 |
0.8432 |
| 3dwn-assembly2.cif.gz_B | 21 | 491 | 1 | 421 | 0.7722 |
0.8428 |
| 2r4p-assembly2.cif.gz_B | 21 | 491 | 1 | 418 | 0.77 |
0.8428 |
| 2r4l-assembly2.cif.gz_B | 21 | 491 | 1 | 421 | 0.7698 |
0.8404 |
| 3pf1-assembly2.cif.gz_B | 21 | 491 | 1 | 421 | 0.7698 |
0.8431 |
| 2r4n-assembly2.cif.gz_B | 21 | 491 | 1 | 421 | 0.7689 |
0.8392 |
| 2r4l-assembly1.cif.gz_A | 21 | 491 | 1 | 412 | 0.7675 |
0.8456 |
| 3pgs-assembly2.cif.gz_B | 21 | 491 | 1 | 421 | 0.7673 |
0.8423 |
| 2r4l-assembly3.cif.gz_C | 21 | 491 | 1 | 416 | 0.7653 |
0.8393 |
| 3pgr-assembly1.cif.gz_A | 21 | 491 | 1 | 373 | 0.7639 |
0.8807 |
Structural Homologs -
SwissProt
| Target | Q-Start | Q-End | T-Start | T-End | Avg TM | Align TM |
|---|---|---|---|---|---|---|
| AF-P43838-F1-model_v4 | 19 | 491 | 21 | 459 | 0.7615 |
0.8336 |
| AF-P10641-F1-model_v4 | 19 | 491 | 21 | 459 | 0.76 |
0.8328 |
| AF-Q8CVU7-F1-model_v4 | 20 | 491 | 25 | 446 | 0.755 |
0.8453 |
| AF-P10384-F1-model_v4 | 19 | 491 | 24 | 446 | 0.7489 |
0.8369 |
| AF-P59741-F1-model_v4 | 19 | 491 | 24 | 446 | 0.7487 |
0.8368 |
| AF-Q8XCN6-F1-model_v4 | 19 | 491 | 24 | 446 | 0.7477 |
0.8355 |
| AF-Q8Z4Y8-F1-model_v4 | 19 | 491 | 24 | 435 | 0.7473 |
0.8456 |
| AF-Q8ZNA5-F1-model_v4 | 20 | 491 | 25 | 435 | 0.7466 |
0.8465 |
| AF-P80603-F1-model_v4 | 19 | 491 | 24 | 428 | 0.7419 |
0.8457 |
| AF-Q9K1M2-F1-model_v4 | 19 | 491 | 22 | 465 | 0.7319 |
0.7987 |