dbCAN Logo

Cluster: HRGMv2_0250_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0250_122 HRGMv2_0250_122_83 97608 99377 + 3.B.1.1.6
STP HRGMv2_0250_122 HRGMv2_0250_122_84 99402 99941 + HD
TC HRGMv2_0250_122 HRGMv2_0250_122_85 100308 103121 + 1.B.42.1.8
TC HRGMv2_0250_122 HRGMv2_0250_122_86 103270 105522 - 2.A.37.1.8
peptidase HRGMv2_0250_122 HRGMv2_0250_122_87 105645 106868 - M20.003
CAZyme HRGMv2_0250_122 HRGMv2_0250_122_88 107839 110067 + GH89
pfam HRGMv2_0250_122 HRGMv2_0250_122_89 110073 111278 + HGSNAT_cat | DUF5009
TC HRGMv2_0250_122 HRGMv2_0250_122_90 111439 113130 + 2.A.81.1.2
Gene ID: HRGMv2_0250_122_83
Type: TC
Location: 97608 - 99377 (+)
Gene ID: HRGMv2_0250_122_84
Type: STP
Location: 99402 - 99941 (+)
Gene ID: HRGMv2_0250_122_85
Type: TC
Location: 100308 - 103121 (+)
Gene ID: HRGMv2_0250_122_86
Type: TC
Location: 103270 - 105522 (-)
Gene ID: HRGMv2_0250_122_87
Type: peptidase
Location: 105645 - 106868 (-)
Gene ID: HRGMv2_0250_122_88
Type: CAZyme
Location: 107839 - 110067 (+)
Gene ID: HRGMv2_0250_122_89
Type: pfam
Location: 110073 - 111278 (+)
Gene ID: HRGMv2_0250_122_90
Type: TC
Location: 111439 - 113130 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List