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Cluster: HRGMv2_0250_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0250_54 HRGMv2_0250_54_11 10218 12323 + 3.A.16.1.1
pfam HRGMv2_0250_54 HRGMv2_0250_54_12 12379 13248 + CTP_transf_1
CAZyme HRGMv2_0250_54 HRGMv2_0250_54_13 13399 14598 - GT19
pfam HRGMv2_0250_54 HRGMv2_0250_54_14 14632 15402 - SurE
TC HRGMv2_0250_54 HRGMv2_0250_54_15 15539 16303 + 8.A.3.2.3
TF HRGMv2_0250_54 HRGMv2_0250_54_16 16313 17206 + HTH_3
pfam HRGMv2_0250_54 HRGMv2_0250_54_17 17243 17956 + DUF5683
CAZyme HRGMv2_0250_54 HRGMv2_0250_54_18 18087 19532 + GH23
Gene ID: HRGMv2_0250_54_11
Type: TC
Location: 10218 - 12323 (+)
Gene ID: HRGMv2_0250_54_12
Type: pfam
Location: 12379 - 13248 (+)
Gene ID: HRGMv2_0250_54_13
Type: CAZyme
Location: 13399 - 14598 (-)
Gene ID: HRGMv2_0250_54_14
Type: pfam
Location: 14632 - 15402 (-)
Gene ID: HRGMv2_0250_54_15
Type: TC
Location: 15539 - 16303 (+)
Gene ID: HRGMv2_0250_54_16
Type: TF
Location: 16313 - 17206 (+)
Gene ID: HRGMv2_0250_54_17
Type: pfam
Location: 17243 - 17956 (+)
Gene ID: HRGMv2_0250_54_18
Type: CAZyme
Location: 18087 - 19532 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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