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Cluster: HRGMv2_0244_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_4 HRGMv2_0244_4_87 99982 101193 - 2.A.1.7.17
CAZyme HRGMv2_0244_4 HRGMv2_0244_4_88 101340 103064 - GH32
TF HRGMv2_0244_4 HRGMv2_0244_4_89 103288 105543 + HTH_AraC | HTH_AraC
TC HRGMv2_0244_4 HRGMv2_0244_4_90 105785 108901 + 1.B.14.6.1
pfam HRGMv2_0244_4 HRGMv2_0244_4_91 109007 110746 + SusD_RagB | SusD-like_3
pfam HRGMv2_0244_4 HRGMv2_0244_4_92 110838 112343 + DUF4960
CAZyme HRGMv2_0244_4 HRGMv2_0244_4_93 112355 113890 + GH32
TC HRGMv2_0244_4 HRGMv2_0244_4_94 114648 115412 - 3.A.1.27.4
TC HRGMv2_0244_4 HRGMv2_0244_4_95 115423 116169 - 3.A.1.27.1
TC HRGMv2_0244_4 HRGMv2_0244_4_96 116312 117175 + 1.B.42.1.2
Gene ID: HRGMv2_0244_4_87
Type: TC
Location: 99982 - 101193 (-)
Gene ID: HRGMv2_0244_4_88
Type: CAZyme
Location: 101340 - 103064 (-)
Gene ID: HRGMv2_0244_4_89
Type: TF
Location: 103288 - 105543 (+)
Gene ID: HRGMv2_0244_4_90
Type: TC
Location: 105785 - 108901 (+)
Gene ID: HRGMv2_0244_4_91
Type: pfam
Location: 109007 - 110746 (+)
Gene ID: HRGMv2_0244_4_92
Type: pfam
Location: 110838 - 112343 (+)
Gene ID: HRGMv2_0244_4_93
Type: CAZyme
Location: 112355 - 113890 (+)
Gene ID: HRGMv2_0244_4_94
Type: TC
Location: 114648 - 115412 (-)
Gene ID: HRGMv2_0244_4_95
Type: TC
Location: 115423 - 116169 (-)
Gene ID: HRGMv2_0244_4_96
Type: TC
Location: 116312 - 117175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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