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Cluster: HRGMv2_0244_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0244_4 HRGMv2_0244_4_63 68089 70476 - GH2
CAZyme HRGMv2_0244_4 HRGMv2_0244_4_64 70501 71604 - GH53
CAZyme HRGMv2_0244_4 HRGMv2_0244_4_65 71682 72737 - GH53
pfam HRGMv2_0244_4 HRGMv2_0244_4_66 72757 74160 - SusE | DUF5111 | DUF5114
TC HRGMv2_0244_4 HRGMv2_0244_4_67 74250 75833 - 8.A.46.1.1
TC HRGMv2_0244_4 HRGMv2_0244_4_68 75927 78899 - 1.B.14.6.1
TC HRGMv2_0244_4 HRGMv2_0244_4_69 79465 79860 - 9.B.124.1.3
peptidase HRGMv2_0244_4 HRGMv2_0244_4_70 80093 80758 + S14.001
STP HRGMv2_0244_4 HRGMv2_0244_4_71 80766 81995 + AAA
TC HRGMv2_0244_4 HRGMv2_0244_4_72 82060 84234 + 2.A.16.2.2
Gene ID: HRGMv2_0244_4_63
Type: CAZyme
Location: 68089 - 70476 (-)
Gene ID: HRGMv2_0244_4_64
Type: CAZyme
Location: 70501 - 71604 (-)
Gene ID: HRGMv2_0244_4_65
Type: CAZyme
Location: 71682 - 72737 (-)
Gene ID: HRGMv2_0244_4_66
Type: pfam
Location: 72757 - 74160 (-)
Gene ID: HRGMv2_0244_4_67
Type: TC
Location: 74250 - 75833 (-)
Gene ID: HRGMv2_0244_4_68
Type: TC
Location: 75927 - 78899 (-)
Gene ID: HRGMv2_0244_4_69
Type: TC
Location: 79465 - 79860 (-)
Gene ID: HRGMv2_0244_4_70
Type: peptidase
Location: 80093 - 80758 (+)
Gene ID: HRGMv2_0244_4_71
Type: STP
Location: 80766 - 81995 (+)
Gene ID: HRGMv2_0244_4_72
Type: TC
Location: 82060 - 84234 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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