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Cluster: HRGMv2_0244_CGC30

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_43 HRGMv2_0244_43_7 9453 11204 - 2.A.21.3.19
sulfatase HRGMv2_0244_43 HRGMv2_0244_43_8 11425 12609 - S1_22
pfam HRGMv2_0244_43 HRGMv2_0244_43_9 13062 14297 - DUF4861
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_10 14359 17613 - GH2
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_11 17630 18829 - GH105
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_12 18873 20189 - GH154
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_13 20219 21352 - GH43_24
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_14 21498 23483 - PL33
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_15 23687 25765 - GH127
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_16 25863 27770 - GH43_29 | GH43_34
CAZyme HRGMv2_0244_43 HRGMv2_0244_43_17 27880 28923 - GH43_19
Gene ID: HRGMv2_0244_43_7
Type: TC
Location: 9453 - 11204 (-)
Gene ID: HRGMv2_0244_43_8
Type: sulfatase
Location: 11425 - 12609 (-)
Gene ID: HRGMv2_0244_43_9
Type: pfam
Location: 13062 - 14297 (-)
Gene ID: HRGMv2_0244_43_10
Type: CAZyme
Location: 14359 - 17613 (-)
Gene ID: HRGMv2_0244_43_11
Type: CAZyme
Location: 17630 - 18829 (-)
Gene ID: HRGMv2_0244_43_12
Type: CAZyme
Location: 18873 - 20189 (-)
Gene ID: HRGMv2_0244_43_13
Type: CAZyme
Location: 20219 - 21352 (-)
Gene ID: HRGMv2_0244_43_14
Type: CAZyme
Location: 21498 - 23483 (-)
Gene ID: HRGMv2_0244_43_15
Type: CAZyme
Location: 23687 - 25765 (-)
Gene ID: HRGMv2_0244_43_16
Type: CAZyme
Location: 25863 - 27770 (-)
Gene ID: HRGMv2_0244_43_17
Type: CAZyme
Location: 27880 - 28923 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0244_43_11 vegetarian > omnivore 1.65546 0.03944

🧭 Explore Read Mapping of CGC

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