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Cluster: HRGMv2_0244_CGC21

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0244_30 HRGMv2_0244_30_1 1 1179 + GH88
CAZyme HRGMv2_0244_30 HRGMv2_0244_30_2 1387 3192 + PL29
CAZyme HRGMv2_0244_30 HRGMv2_0244_30_3 3275 5083 + PL29
CAZyme HRGMv2_0244_30 HRGMv2_0244_30_4 5245 7260 - GH20
STP HRGMv2_0244_30 HRGMv2_0244_30_5 7437 9863 + AAA
pfam HRGMv2_0244_30 HRGMv2_0244_30_6 9860 10987 + TGT
TC HRGMv2_0244_30 HRGMv2_0244_30_7 10991 12229 + 1.B.42.1.13
TC HRGMv2_0244_30 HRGMv2_0244_30_8 12273 13979 + 3.A.18.1.1
peptidase HRGMv2_0244_30 HRGMv2_0244_30_9 14193 16388 - S09.UPB
TC HRGMv2_0244_30 HRGMv2_0244_30_10 16428 17087 - 9.B.20.1.4
Gene ID: HRGMv2_0244_30_1
Type: CAZyme
Location: 1 - 1179 (+)
Gene ID: HRGMv2_0244_30_2
Type: CAZyme
Location: 1387 - 3192 (+)
Gene ID: HRGMv2_0244_30_3
Type: CAZyme
Location: 3275 - 5083 (+)
Gene ID: HRGMv2_0244_30_4
Type: CAZyme
Location: 5245 - 7260 (-)
Gene ID: HRGMv2_0244_30_5
Type: STP
Location: 7437 - 9863 (+)
Gene ID: HRGMv2_0244_30_6
Type: pfam
Location: 9860 - 10987 (+)
Gene ID: HRGMv2_0244_30_7
Type: TC
Location: 10991 - 12229 (+)
Gene ID: HRGMv2_0244_30_8
Type: TC
Location: 12273 - 13979 (+)
Gene ID: HRGMv2_0244_30_9
Type: peptidase
Location: 14193 - 16388 (-)
Gene ID: HRGMv2_0244_30_10
Type: TC
Location: 16428 - 17087 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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