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Cluster: HRGMv2_0244_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_11 HRGMv2_0244_11_8 6310 8679 + 1.B.14.15.2
pfam HRGMv2_0244_11 HRGMv2_0244_11_9 9029 9958 - UbiA
STP HRGMv2_0244_11 HRGMv2_0244_11_10 10060 10692 + HD
CAZyme HRGMv2_0244_11 HRGMv2_0244_11_11 10718 11911 + GT4
CAZyme HRGMv2_0244_11 HRGMv2_0244_11_12 11934 12950 - GT2
pfam HRGMv2_0244_11 HRGMv2_0244_11_13 13136 14617 + Polysacc_synt | Polysacc_synt_3
CAZyme HRGMv2_0244_11 HRGMv2_0244_11_14 14610 15602 + GT2
CAZyme HRGMv2_0244_11 HRGMv2_0244_11_15 15679 16623 + GT2
Gene ID: HRGMv2_0244_11_8
Type: TC
Location: 6310 - 8679 (+)
Gene ID: HRGMv2_0244_11_9
Type: pfam
Location: 9029 - 9958 (-)
Gene ID: HRGMv2_0244_11_10
Type: STP
Location: 10060 - 10692 (+)
Gene ID: HRGMv2_0244_11_11
Type: CAZyme
Location: 10718 - 11911 (+)
Gene ID: HRGMv2_0244_11_12
Type: CAZyme
Location: 11934 - 12950 (-)
Gene ID: HRGMv2_0244_11_13
Type: pfam
Location: 13136 - 14617 (+)
Gene ID: HRGMv2_0244_11_14
Type: CAZyme
Location: 14610 - 15602 (+)
Gene ID: HRGMv2_0244_11_15
Type: CAZyme
Location: 15679 - 16623 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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