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Cluster: HRGMv2_0244_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0244_10 HRGMv2_0244_10_14 10708 12843 - GH13_38
pfam HRGMv2_0244_10 HRGMv2_0244_10_15 12851 13738 - Acyl_transf_1
CAZyme HRGMv2_0244_10 HRGMv2_0244_10_16 13880 14809 + GH73
pfam HRGMv2_0244_10 HRGMv2_0244_10_17 14942 17368 - UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
CAZyme HRGMv2_0244_10 HRGMv2_0244_10_18 17426 18166 - GT51
TC HRGMv2_0244_10 HRGMv2_0244_10_19 18349 19023 - 9.B.186.1.3
pfam HRGMv2_0244_10 HRGMv2_0244_10_20 19225 20706 + tRNA-synt_2b | HGTP_anticodon | ProRS-C_1
TC HRGMv2_0244_10 HRGMv2_0244_10_21 20875 22572 + 2.A.81.1.2
pfam HRGMv2_0244_10 HRGMv2_0244_10_22 22649 23374 - Methyltrans_RNA | PUA_4
TC HRGMv2_0244_10 HRGMv2_0244_10_23 23391 24659 - 2.A.1.10.1
Gene ID: HRGMv2_0244_10_14
Type: CAZyme
Location: 10708 - 12843 (-)
Gene ID: HRGMv2_0244_10_15
Type: pfam
Location: 12851 - 13738 (-)
Gene ID: HRGMv2_0244_10_16
Type: CAZyme
Location: 13880 - 14809 (+)
Gene ID: HRGMv2_0244_10_17
Type: pfam
Location: 14942 - 17368 (-)
Gene ID: HRGMv2_0244_10_18
Type: CAZyme
Location: 17426 - 18166 (-)
Gene ID: HRGMv2_0244_10_19
Type: TC
Location: 18349 - 19023 (-)
Gene ID: HRGMv2_0244_10_20
Type: pfam
Location: 19225 - 20706 (+)
Gene ID: HRGMv2_0244_10_21
Type: TC
Location: 20875 - 22572 (+)
Gene ID: HRGMv2_0244_10_22
Type: pfam
Location: 22649 - 23374 (-)
Gene ID: HRGMv2_0244_10_23
Type: TC
Location: 23391 - 24659 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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