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Cluster: HRGMv2_0244_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_8 HRGMv2_0244_8_45 50198 51406 + 2.A.1.35.1
TC HRGMv2_0244_8 HRGMv2_0244_8_46 51539 53509 + 2.A.72.1.3
pfam HRGMv2_0244_8 HRGMv2_0244_8_47 53681 54103 + H2O2_YaaD
STP HRGMv2_0244_8 HRGMv2_0244_8_48 54111 54497 + Glyoxalase
TC HRGMv2_0244_8 HRGMv2_0244_8_49 54575 55366 + 2.A.5.5.2
TC HRGMv2_0244_8 HRGMv2_0244_8_50 55411 56853 - 2.A.25.1.5
pfam HRGMv2_0244_8 HRGMv2_0244_8_51 57059 58264 - DUF4421
CAZyme HRGMv2_0244_8 HRGMv2_0244_8_52 58429 62331 - GH31_18
Gene ID: HRGMv2_0244_8_45
Type: TC
Location: 50198 - 51406 (+)
Gene ID: HRGMv2_0244_8_46
Type: TC
Location: 51539 - 53509 (+)
Gene ID: HRGMv2_0244_8_47
Type: pfam
Location: 53681 - 54103 (+)
Gene ID: HRGMv2_0244_8_48
Type: STP
Location: 54111 - 54497 (+)
Gene ID: HRGMv2_0244_8_49
Type: TC
Location: 54575 - 55366 (+)
Gene ID: HRGMv2_0244_8_50
Type: TC
Location: 55411 - 56853 (-)
Gene ID: HRGMv2_0244_8_51
Type: pfam
Location: 57059 - 58264 (-)
Gene ID: HRGMv2_0244_8_52
Type: CAZyme
Location: 58429 - 62331 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0244_8_45 vegetarian > vegan 1.34604 0.02324
HRGMv2_0244_8_47 vegetarian > vegan 1.09094 0.02324

🧭 Explore Read Mapping of CGC

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