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Cluster: HRGMv2_0244_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_8 HRGMv2_0244_8_9 12822 14108 + 2.A.35.1.5
NULL(UNKNOWN) HRGMv2_0244_8 HRGMv2_0244_8_10 14163 15011 + NULL(UNKNOWN)
[View Structural Homologs]
peptidase HRGMv2_0244_8 HRGMv2_0244_8_11 15116 16402 + I04.UPW
TC HRGMv2_0244_8 HRGMv2_0244_8_12 16471 17442 - 3.A.2.1.1
TC HRGMv2_0244_8 HRGMv2_0244_8_13 17449 19035 - 3.A.2.1.3
pfam HRGMv2_0244_8 HRGMv2_0244_8_14 19054 19587 - OSCP
pfam HRGMv2_0244_8 HRGMv2_0244_8_15 19597 20115 - ATP-synt_B | YMF19
TC HRGMv2_0244_8 HRGMv2_0244_8_16 20166 20408 - 3.A.2.1.6
TC HRGMv2_0244_8 HRGMv2_0244_8_17 20464 21519 - 3.A.2.1.7
NULL(UNKNOWN) HRGMv2_0244_8 HRGMv2_0244_8_18 21526 21954 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0244_8 HRGMv2_0244_8_19 21970 22212 - ATP-synt_DE_N
TC HRGMv2_0244_8 HRGMv2_0244_8_20 22242 23768 - 3.A.2.1.2
pfam HRGMv2_0244_8 HRGMv2_0244_8_21 23921 24898 - PFK
TC HRGMv2_0244_8 HRGMv2_0244_8_22 24937 26331 - 2.A.62.1.3
STP HRGMv2_0244_8 HRGMv2_0244_8_23 26582 27364 + NUDIX
CAZyme HRGMv2_0244_8 HRGMv2_0244_8_24 27494 28477 + GH179
Gene ID: HRGMv2_0244_8_9
Type: TC
Location: 12822 - 14108 (+)
Gene ID: HRGMv2_0244_8_10
Type:
Location: 14163 - 15011 (+)
Gene ID: HRGMv2_0244_8_11
Type: peptidase
Location: 15116 - 16402 (+)
Gene ID: HRGMv2_0244_8_12
Type: TC
Location: 16471 - 17442 (-)
Gene ID: HRGMv2_0244_8_13
Type: TC
Location: 17449 - 19035 (-)
Gene ID: HRGMv2_0244_8_14
Type: pfam
Location: 19054 - 19587 (-)
Gene ID: HRGMv2_0244_8_15
Type: pfam
Location: 19597 - 20115 (-)
Gene ID: HRGMv2_0244_8_16
Type: TC
Location: 20166 - 20408 (-)
Gene ID: HRGMv2_0244_8_17
Type: TC
Location: 20464 - 21519 (-)
Gene ID: HRGMv2_0244_8_18
Type:
Location: 21526 - 21954 (-)
Gene ID: HRGMv2_0244_8_19
Type: pfam
Location: 21970 - 22212 (-)
Gene ID: HRGMv2_0244_8_20
Type: TC
Location: 22242 - 23768 (-)
Gene ID: HRGMv2_0244_8_21
Type: pfam
Location: 23921 - 24898 (-)
Gene ID: HRGMv2_0244_8_22
Type: TC
Location: 24937 - 26331 (-)
Gene ID: HRGMv2_0244_8_23
Type: STP
Location: 26582 - 27364 (+)
Gene ID: HRGMv2_0244_8_24
Type: CAZyme
Location: 27494 - 28477 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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