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Cluster: HRGMv2_0244_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_6 HRGMv2_0244_6_52 62298 63641 + 3.D.6.1.2
TC HRGMv2_0244_6 HRGMv2_0244_6_53 63767 64762 + 3.D.6.1.2
pfam HRGMv2_0244_6 HRGMv2_0244_6_54 64759 65334 + FMN_bind
TC HRGMv2_0244_6 HRGMv2_0244_6_55 65347 65928 + 3.D.6.1.2
TC HRGMv2_0244_6 HRGMv2_0244_6_56 65978 66577 + 3.D.6.1.2
pfam HRGMv2_0244_6 HRGMv2_0244_6_57 66683 67720 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | KR | GDP_Man_Dehyd
pfam HRGMv2_0244_6 HRGMv2_0244_6_58 67833 68876 - Phytase-like
CAZyme HRGMv2_0244_6 HRGMv2_0244_6_59 69081 72899 + GT2
Gene ID: HRGMv2_0244_6_52
Type: TC
Location: 62298 - 63641 (+)
Gene ID: HRGMv2_0244_6_53
Type: TC
Location: 63767 - 64762 (+)
Gene ID: HRGMv2_0244_6_54
Type: pfam
Location: 64759 - 65334 (+)
Gene ID: HRGMv2_0244_6_55
Type: TC
Location: 65347 - 65928 (+)
Gene ID: HRGMv2_0244_6_56
Type: TC
Location: 65978 - 66577 (+)
Gene ID: HRGMv2_0244_6_57
Type: pfam
Location: 66683 - 67720 (+)
Gene ID: HRGMv2_0244_6_58
Type: pfam
Location: 67833 - 68876 (-)
Gene ID: HRGMv2_0244_6_59
Type: CAZyme
Location: 69081 - 72899 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0244_6_57 vegetarian > vegan 1.95101 0.02324

🧭 Explore Read Mapping of CGC

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