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Cluster: HRGMv2_0244_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0244_6 HRGMv2_0244_6_10 9940 11466 - 2.A.17.4.7
pfam HRGMv2_0244_6 HRGMv2_0244_6_11 11506 12288 - OMP_b-brl_2
CAZyme HRGMv2_0244_6 HRGMv2_0244_6_12 12314 13669 - CBM50
sulfatase HRGMv2_0244_6 HRGMv2_0244_6_13 13780 14535 + S1_4
pfam HRGMv2_0244_6 HRGMv2_0244_6_14 14601 17435 + UvrA_DNA-bind | UvrA_inter
TC HRGMv2_0244_6 HRGMv2_0244_6_15 17454 18191 + 3.A.1.128.6
CAZyme HRGMv2_0244_6 HRGMv2_0244_6_16 18290 22363 + CBM32 | GH2
Gene ID: HRGMv2_0244_6_10
Type: TC
Location: 9940 - 11466 (-)
Gene ID: HRGMv2_0244_6_11
Type: pfam
Location: 11506 - 12288 (-)
Gene ID: HRGMv2_0244_6_12
Type: CAZyme
Location: 12314 - 13669 (-)
Gene ID: HRGMv2_0244_6_13
Type: sulfatase
Location: 13780 - 14535 (+)
Gene ID: HRGMv2_0244_6_14
Type: pfam
Location: 14601 - 17435 (+)
Gene ID: HRGMv2_0244_6_15
Type: TC
Location: 17454 - 18191 (+)
Gene ID: HRGMv2_0244_6_16
Type: CAZyme
Location: 18290 - 22363 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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