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Cluster: HRGMv2_0243_CGC38

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0243_41 HRGMv2_0243_41_1 3 1091 - 2.A.6.2.20
TC HRGMv2_0243_41 HRGMv2_0243_41_2 1092 4205 - 2.A.6.2.22
TC HRGMv2_0243_41 HRGMv2_0243_41_3 4202 5323 - 2.A.6.2.44
TC HRGMv2_0243_41 HRGMv2_0243_41_4 5367 6569 - 9.B.146.1.4
pfam HRGMv2_0243_41 HRGMv2_0243_41_5 6667 7239 - NusG
pfam HRGMv2_0243_41 HRGMv2_0243_41_6 7745 8953 - Phage_integrase | Phage_int_SAM_5 | Arm-DNA-bind_5
CAZyme HRGMv2_0243_41 HRGMv2_0243_41_7 9042 9539 - GH24
Gene ID: HRGMv2_0243_41_1
Type: TC
Location: 3 - 1091 (-)
Gene ID: HRGMv2_0243_41_2
Type: TC
Location: 1092 - 4205 (-)
Gene ID: HRGMv2_0243_41_3
Type: TC
Location: 4202 - 5323 (-)
Gene ID: HRGMv2_0243_41_4
Type: TC
Location: 5367 - 6569 (-)
Gene ID: HRGMv2_0243_41_5
Type: pfam
Location: 6667 - 7239 (-)
Gene ID: HRGMv2_0243_41_6
Type: pfam
Location: 7745 - 8953 (-)
Gene ID: HRGMv2_0243_41_7
Type: CAZyme
Location: 9042 - 9539 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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