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Cluster: HRGMv2_0223_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0223_65 HRGMv2_0223_65_7 10446 12200 - 8.A.46.2.2
TC HRGMv2_0223_65 HRGMv2_0223_65_8 12250 15429 - 1.B.14.6.13
CAZyme HRGMv2_0223_65 HRGMv2_0223_65_9 16017 17696 - CBM72 | GH5_4
TF HRGMv2_0223_65 HRGMv2_0223_65_10 17863 21987 + HTH_AraC
TC HRGMv2_0223_65 HRGMv2_0223_65_11 22247 22597 + 3.D.1.8.1
TC HRGMv2_0223_65 HRGMv2_0223_65_12 22588 23403 + 3.D.1.6.1
TC HRGMv2_0223_65 HRGMv2_0223_65_13 23419 24996 + 3.D.1.5.1
TC HRGMv2_0223_65 HRGMv2_0223_65_14 25120 26205 + 3.D.1.5.1
STP HRGMv2_0223_65 HRGMv2_0223_65_15 26219 26788 + Fer4 | Fer4
TC HRGMv2_0223_65 HRGMv2_0223_65_16 26794 27315 + 3.D.9.1.1
TC HRGMv2_0223_65 HRGMv2_0223_65_17 27312 27620 + 3.D.9.1.1
TC HRGMv2_0223_65 HRGMv2_0223_65_18 27628 29589 + 3.D.9.1.1
TC HRGMv2_0223_65 HRGMv2_0223_65_19 29626 31149 + 3.D.1.5.1
TC HRGMv2_0223_65 HRGMv2_0223_65_20 31174 32646 + 3.D.1.2.1
Gene ID: HRGMv2_0223_65_7
Type: TC
Location: 10446 - 12200 (-)
Gene ID: HRGMv2_0223_65_8
Type: TC
Location: 12250 - 15429 (-)
Gene ID: HRGMv2_0223_65_9
Type: CAZyme
Location: 16017 - 17696 (-)
Gene ID: HRGMv2_0223_65_10
Type: TF
Location: 17863 - 21987 (+)
Gene ID: HRGMv2_0223_65_11
Type: TC
Location: 22247 - 22597 (+)
Gene ID: HRGMv2_0223_65_12
Type: TC
Location: 22588 - 23403 (+)
Gene ID: HRGMv2_0223_65_13
Type: TC
Location: 23419 - 24996 (+)
Gene ID: HRGMv2_0223_65_14
Type: TC
Location: 25120 - 26205 (+)
Gene ID: HRGMv2_0223_65_15
Type: STP
Location: 26219 - 26788 (+)
Gene ID: HRGMv2_0223_65_16
Type: TC
Location: 26794 - 27315 (+)
Gene ID: HRGMv2_0223_65_17
Type: TC
Location: 27312 - 27620 (+)
Gene ID: HRGMv2_0223_65_18
Type: TC
Location: 27628 - 29589 (+)
Gene ID: HRGMv2_0223_65_19
Type: TC
Location: 29626 - 31149 (+)
Gene ID: HRGMv2_0223_65_20
Type: TC
Location: 31174 - 32646 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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