Cluster: HRGMv2_0223_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0223
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0223_27 | HRGMv2_0223_27_40 | 50199 | 50915 | + | 3.A.1.140.1 |
| pfam | HRGMv2_0223_27 | HRGMv2_0223_27_41 | 50972 | 52294 | + | AA_kinase | ACT_9 |
| pfam | HRGMv2_0223_27 | HRGMv2_0223_27_42 | 52359 | 53534 | + | Orn_DAP_Arg_deC | Orn_Arg_deC_N |
| CAZyme | HRGMv2_0223_27 | HRGMv2_0223_27_43 | 53538 | 54872 | + | GT2 |
Gene ID: HRGMv2_0223_27_40
Type: TC
Location: 50199 - 50915 (+)
Type: TC
Location: 50199 - 50915 (+)
Gene ID: HRGMv2_0223_27_41
Type: pfam
Location: 50972 - 52294 (+)
Type: pfam
Location: 50972 - 52294 (+)
Gene ID: HRGMv2_0223_27_42
Type: pfam
Location: 52359 - 53534 (+)
Type: pfam
Location: 52359 - 53534 (+)
Gene ID: HRGMv2_0223_27_43
Type: CAZyme
Location: 53538 - 54872 (+)
Type: CAZyme
Location: 53538 - 54872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella absiana
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0223_27_42 | vegetarian > vegan | 2.97736 | 0.02538 |