Cluster: HRGMv2_0222_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0222
- CGC Family ID: CGCFAM_06594
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0222_9 | HRGMv2_0222_9_34 | 34748 | 35458 | - | 9.B.18.1.3 |
| CAZyme | HRGMv2_0222_9 | HRGMv2_0222_9_35 | 35701 | 36462 | - | GT2 |
| CAZyme | HRGMv2_0222_9 | HRGMv2_0222_9_36 | 36487 | 37290 | - | GT2 |
| CAZyme | HRGMv2_0222_9 | HRGMv2_0222_9_37 | 37414 | 38265 | + | GH16_3 |
| pfam | HRGMv2_0222_9 | HRGMv2_0222_9_38 | 38271 | 39242 | - | GT-D-like |
| CAZyme | HRGMv2_0222_9 | HRGMv2_0222_9_39 | 39276 | 40091 | - | GT23 |
Gene ID: HRGMv2_0222_9_34
Type: TC
Location: 34748 - 35458 (-)
Type: TC
Location: 34748 - 35458 (-)
Gene ID: HRGMv2_0222_9_35
Type: CAZyme
Location: 35701 - 36462 (-)
Type: CAZyme
Location: 35701 - 36462 (-)
Gene ID: HRGMv2_0222_9_36
Type: CAZyme
Location: 36487 - 37290 (-)
Type: CAZyme
Location: 36487 - 37290 (-)
Gene ID: HRGMv2_0222_9_37
Type: CAZyme
Location: 37414 - 38265 (+)
Type: CAZyme
Location: 37414 - 38265 (+)
Gene ID: HRGMv2_0222_9_38
Type: pfam
Location: 38271 - 39242 (-)
Type: pfam
Location: 38271 - 39242 (-)
Gene ID: HRGMv2_0222_9_39
Type: CAZyme
Location: 39276 - 40091 (-)
Type: CAZyme
Location: 39276 - 40091 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp945873145
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.