Cluster: HRGMv2_0217_CGC49
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0217
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0217_194 | HRGMv2_0217_194_7 | 12060 | 14207 | + | GH92 |
| CAZyme | HRGMv2_0217_194 | HRGMv2_0217_194_8 | 14241 | 15725 | + | GH125 |
| NULL(UNKNOWN) | HRGMv2_0217_194 | HRGMv2_0217_194_9 | 15814 | 16533 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0217_194 | HRGMv2_0217_194_10 | 16620 | 17882 | - | 1.A.11.2.7 |
| pfam | HRGMv2_0217_194 | HRGMv2_0217_194_11 | 17946 | 18302 | - | P-II |
| CAZyme | HRGMv2_0217_194 | HRGMv2_0217_194_12 | 18572 | 21730 | - | CE20 |
| CAZyme | HRGMv2_0217_194 | HRGMv2_0217_194_13 | 21783 | 23648 | - | GH20 |
| TC | HRGMv2_0217_194 | HRGMv2_0217_194_14 | 24089 | 25891 | - | 8.A.46.1.4 |
| TC | HRGMv2_0217_194 | HRGMv2_0217_194_15 | 25930 | 29313 | - | 1.B.14.6.1 |
| pfam | HRGMv2_0217_194 | HRGMv2_0217_194_16 | 29353 | 29748 | - | fn3 |
| CAZyme | HRGMv2_0217_194 | HRGMv2_0217_194_17 | 29780 | 31057 | - | GH33 |
| pfam | HRGMv2_0217_194 | HRGMv2_0217_194_18 | 31078 | 32265 | - | GlcNAc_2-epim |
| pfam | HRGMv2_0217_194 | HRGMv2_0217_194_19 | 32291 | 33208 | - | DHDPS |
| TC | HRGMv2_0217_194 | HRGMv2_0217_194_20 | 33259 | 34494 | - | 2.A.1.14.25 |
Gene ID: HRGMv2_0217_194_7
Type: CAZyme
Location: 12060 - 14207 (+)
Type: CAZyme
Location: 12060 - 14207 (+)
Gene ID: HRGMv2_0217_194_8
Type: CAZyme
Location: 14241 - 15725 (+)
Type: CAZyme
Location: 14241 - 15725 (+)
Gene ID: HRGMv2_0217_194_9
Type:
Location: 15814 - 16533 (-)
Type:
Location: 15814 - 16533 (-)
Gene ID: HRGMv2_0217_194_10
Type: TC
Location: 16620 - 17882 (-)
Type: TC
Location: 16620 - 17882 (-)
Gene ID: HRGMv2_0217_194_11
Type: pfam
Location: 17946 - 18302 (-)
Type: pfam
Location: 17946 - 18302 (-)
Gene ID: HRGMv2_0217_194_12
Type: CAZyme
Location: 18572 - 21730 (-)
Type: CAZyme
Location: 18572 - 21730 (-)
Gene ID: HRGMv2_0217_194_13
Type: CAZyme
Location: 21783 - 23648 (-)
Type: CAZyme
Location: 21783 - 23648 (-)
Gene ID: HRGMv2_0217_194_14
Type: TC
Location: 24089 - 25891 (-)
Type: TC
Location: 24089 - 25891 (-)
Gene ID: HRGMv2_0217_194_15
Type: TC
Location: 25930 - 29313 (-)
Type: TC
Location: 25930 - 29313 (-)
Gene ID: HRGMv2_0217_194_16
Type: pfam
Location: 29353 - 29748 (-)
Type: pfam
Location: 29353 - 29748 (-)
Gene ID: HRGMv2_0217_194_17
Type: CAZyme
Location: 29780 - 31057 (-)
Type: CAZyme
Location: 29780 - 31057 (-)
Gene ID: HRGMv2_0217_194_18
Type: pfam
Location: 31078 - 32265 (-)
Type: pfam
Location: 31078 - 32265 (-)
Gene ID: HRGMv2_0217_194_19
Type: pfam
Location: 32291 - 33208 (-)
Type: pfam
Location: 32291 - 33208 (-)
Gene ID: HRGMv2_0217_194_20
Type: TC
Location: 33259 - 34494 (-)
Type: TC
Location: 33259 - 34494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.