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Cluster: HRGMv2_0217_CGC35

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0217_148 HRGMv2_0217_148_1 517 1227 - 3.A.1.124.5
pfam HRGMv2_0217_148 HRGMv2_0217_148_2 1264 2664 - DUF5687
CAZyme HRGMv2_0217_148 HRGMv2_0217_148_3 2882 3838 - GH43_1
CAZyme HRGMv2_0217_148 HRGMv2_0217_148_4 3885 5009 - GH10
TC HRGMv2_0217_148 HRGMv2_0217_148_5 5041 6444 - 2.A.2.3.2
pfam HRGMv2_0217_148 HRGMv2_0217_148_6 6457 7659 - Lipase_GDSL | Lipase_GDSL_2
TF HRGMv2_0217_148 HRGMv2_0217_148_7 7912 11832 + HTH_AraC
CAZyme HRGMv2_0217_148 HRGMv2_0217_148_8 11916 13922 + GH67
Gene ID: HRGMv2_0217_148_1
Type: TC
Location: 517 - 1227 (-)
Gene ID: HRGMv2_0217_148_2
Type: pfam
Location: 1264 - 2664 (-)
Gene ID: HRGMv2_0217_148_3
Type: CAZyme
Location: 2882 - 3838 (-)
Gene ID: HRGMv2_0217_148_4
Type: CAZyme
Location: 3885 - 5009 (-)
Gene ID: HRGMv2_0217_148_5
Type: TC
Location: 5041 - 6444 (-)
Gene ID: HRGMv2_0217_148_6
Type: pfam
Location: 6457 - 7659 (-)
Gene ID: HRGMv2_0217_148_7
Type: TF
Location: 7912 - 11832 (+)
Gene ID: HRGMv2_0217_148_8
Type: CAZyme
Location: 11916 - 13922 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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