Cluster: HRGMv2_0217_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0217
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0217_70 | HRGMv2_0217_70_3 | 2291 | 3274 | - | GH179 |
| pfam | HRGMv2_0217_70 | HRGMv2_0217_70_4 | 3385 | 3990 | - | MMR_HSR1 | FeoB_N |
| TC | HRGMv2_0217_70 | HRGMv2_0217_70_5 | 4078 | 5910 | - | 3.A.1.120.6 |
| pfam | HRGMv2_0217_70 | HRGMv2_0217_70_6 | 6063 | 8117 | + | ATP-synt_ab | Rho_RNA_bind |
| NULL(UNKNOWN) | HRGMv2_0217_70 | HRGMv2_0217_70_7 | 8439 | 8579 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | HRGMv2_0217_70 | HRGMv2_0217_70_8 | 8681 | 10861 | - | GH20 |
Gene ID: HRGMv2_0217_70_3
Type: CAZyme
Location: 2291 - 3274 (-)
Type: CAZyme
Location: 2291 - 3274 (-)
Gene ID: HRGMv2_0217_70_4
Type: pfam
Location: 3385 - 3990 (-)
Type: pfam
Location: 3385 - 3990 (-)
Gene ID: HRGMv2_0217_70_5
Type: TC
Location: 4078 - 5910 (-)
Type: TC
Location: 4078 - 5910 (-)
Gene ID: HRGMv2_0217_70_6
Type: pfam
Location: 6063 - 8117 (+)
Type: pfam
Location: 6063 - 8117 (+)
Gene ID: HRGMv2_0217_70_7
Type:
Location: 8439 - 8579 (+)
Type:
Location: 8439 - 8579 (+)
Gene ID: HRGMv2_0217_70_8
Type: CAZyme
Location: 8681 - 10861 (-)
Type: CAZyme
Location: 8681 - 10861 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Prevotella
Species
Prevotella sp900544825
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.