Cluster: HRGMv2_0213_CGC43
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0213
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0213_35 | HRGMv2_0213_35_17 | 22953 | 24344 | + | 3.A.1.11.8 |
| TC | HRGMv2_0213_35 | HRGMv2_0213_35_18 | 24356 | 25138 | + | 3.A.1.11.8 |
| TC | HRGMv2_0213_35 | HRGMv2_0213_35_19 | 25138 | 25929 | + | 3.A.1.11.8 |
| TC | HRGMv2_0213_35 | HRGMv2_0213_35_20 | 25926 | 27221 | + | 3.A.1.11.7 |
| STP | HRGMv2_0213_35 | HRGMv2_0213_35_21 | 27480 | 28109 | - | Pribosyltran |
| pfam | HRGMv2_0213_35 | HRGMv2_0213_35_22 | 28299 | 29963 | + | PRK |
| CAZyme | HRGMv2_0213_35 | HRGMv2_0213_35_23 | 29970 | 31073 | - | GH43_24 |
Gene ID: HRGMv2_0213_35_17
Type: TC
Location: 22953 - 24344 (+)
Type: TC
Location: 22953 - 24344 (+)
Gene ID: HRGMv2_0213_35_18
Type: TC
Location: 24356 - 25138 (+)
Type: TC
Location: 24356 - 25138 (+)
Gene ID: HRGMv2_0213_35_19
Type: TC
Location: 25138 - 25929 (+)
Type: TC
Location: 25138 - 25929 (+)
Gene ID: HRGMv2_0213_35_20
Type: TC
Location: 25926 - 27221 (+)
Type: TC
Location: 25926 - 27221 (+)
Gene ID: HRGMv2_0213_35_21
Type: STP
Location: 27480 - 28109 (-)
Type: STP
Location: 27480 - 28109 (-)
Gene ID: HRGMv2_0213_35_22
Type: pfam
Location: 28299 - 29963 (+)
Type: pfam
Location: 28299 - 29963 (+)
Gene ID: HRGMv2_0213_35_23
Type: CAZyme
Location: 29970 - 31073 (-)
Type: CAZyme
Location: 29970 - 31073 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
UBA932
Genus
Cryptobacteroides
Species
Cryptobacteroides sp900545245
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.