dbCAN Logo

Cluster: HRGMv2_0213_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0213_15 HRGMv2_0213_15_29 40621 41187 + 9.B.171.1.2
NULL(UNKNOWN) HRGMv2_0213_15 HRGMv2_0213_15_30 41237 43474 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0213_15 HRGMv2_0213_15_31 43458 44729 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0213_15 HRGMv2_0213_15_32 44754 46520 + GH78
pfam HRGMv2_0213_15 HRGMv2_0213_15_33 46541 47422 - Exo_endo_phos
pfam HRGMv2_0213_15 HRGMv2_0213_15_34 47591 48643 + ADH_zinc_N | ADH_N
TC HRGMv2_0213_15 HRGMv2_0213_15_35 48683 50284 + 2.A.21.3.10
TF HRGMv2_0213_15 HRGMv2_0213_15_36 50510 53359 + LacI
CAZyme HRGMv2_0213_15 HRGMv2_0213_15_37 53414 55543 + GH3
NULL(UNKNOWN) HRGMv2_0213_15 HRGMv2_0213_15_38 55549 57402 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0213_15 HRGMv2_0213_15_39 57415 60468 + 1.B.14.6.1
Gene ID: HRGMv2_0213_15_29
Type: TC
Location: 40621 - 41187 (+)
Gene ID: HRGMv2_0213_15_30
Type:
Location: 41237 - 43474 (+)
Gene ID: HRGMv2_0213_15_31
Type:
Location: 43458 - 44729 (+)
Gene ID: HRGMv2_0213_15_32
Type: CAZyme
Location: 44754 - 46520 (+)
Gene ID: HRGMv2_0213_15_33
Type: pfam
Location: 46541 - 47422 (-)
Gene ID: HRGMv2_0213_15_34
Type: pfam
Location: 47591 - 48643 (+)
Gene ID: HRGMv2_0213_15_35
Type: TC
Location: 48683 - 50284 (+)
Gene ID: HRGMv2_0213_15_36
Type: TF
Location: 50510 - 53359 (+)
Gene ID: HRGMv2_0213_15_37
Type: CAZyme
Location: 53414 - 55543 (+)
Gene ID: HRGMv2_0213_15_38
Type:
Location: 55549 - 57402 (+)
Gene ID: HRGMv2_0213_15_39
Type: TC
Location: 57415 - 60468 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List