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Cluster: HRGMv2_0213_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0213_10 HRGMv2_0213_10_58 64475 66340 - 3.A.2.2.2
pfam HRGMv2_0213_10 HRGMv2_0213_10_59 66291 66902 - ATP-synt_D
NULL(UNKNOWN) HRGMv2_0213_10 HRGMv2_0213_10_60 66937 67062 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0213_10 HRGMv2_0213_10_61 67076 68395 - 3.A.2.3.3
TC HRGMv2_0213_10 HRGMv2_0213_10_62 68385 70139 - 3.A.2.3.3
pfam HRGMv2_0213_10 HRGMv2_0213_10_63 70222 70839 - DUF2764
NULL(UNKNOWN) HRGMv2_0213_10 HRGMv2_0213_10_64 70841 71446 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0213_10 HRGMv2_0213_10_65 71503 72645 - 3.B.1.1.2
pfam HRGMv2_0213_10 HRGMv2_0213_10_66 72645 73121 - Biotin_lipoyl | HlyD_3 | Biotin_lipoyl_2
NULL(UNKNOWN) HRGMv2_0213_10 HRGMv2_0213_10_67 73201 73512 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0213_10 HRGMv2_0213_10_68 73590 75152 - 3.B.1.1.2
TF HRGMv2_0213_10 HRGMv2_0213_10_69 75235 75780 + GerE
STP HRGMv2_0213_10 HRGMv2_0213_10_70 75905 76831 + FecR
TC HRGMv2_0213_10 HRGMv2_0213_10_71 76867 80286 + 1.B.14.6.1
TC HRGMv2_0213_10 HRGMv2_0213_10_72 80298 81851 + 8.A.46.1.3
pfam HRGMv2_0213_10 HRGMv2_0213_10_73 81898 83001 + Fib_succ_major
CAZyme HRGMv2_0213_10 HRGMv2_0213_10_74 82976 84328 + GH27
Gene ID: HRGMv2_0213_10_58
Type: TC
Location: 64475 - 66340 (-)
Gene ID: HRGMv2_0213_10_59
Type: pfam
Location: 66291 - 66902 (-)
Gene ID: HRGMv2_0213_10_60
Type:
Location: 66937 - 67062 (-)
Gene ID: HRGMv2_0213_10_61
Type: TC
Location: 67076 - 68395 (-)
Gene ID: HRGMv2_0213_10_62
Type: TC
Location: 68385 - 70139 (-)
Gene ID: HRGMv2_0213_10_63
Type: pfam
Location: 70222 - 70839 (-)
Gene ID: HRGMv2_0213_10_64
Type:
Location: 70841 - 71446 (-)
Gene ID: HRGMv2_0213_10_65
Type: TC
Location: 71503 - 72645 (-)
Gene ID: HRGMv2_0213_10_66
Type: pfam
Location: 72645 - 73121 (-)
Gene ID: HRGMv2_0213_10_67
Type:
Location: 73201 - 73512 (-)
Gene ID: HRGMv2_0213_10_68
Type: TC
Location: 73590 - 75152 (-)
Gene ID: HRGMv2_0213_10_69
Type: TF
Location: 75235 - 75780 (+)
Gene ID: HRGMv2_0213_10_70
Type: STP
Location: 75905 - 76831 (+)
Gene ID: HRGMv2_0213_10_71
Type: TC
Location: 76867 - 80286 (+)
Gene ID: HRGMv2_0213_10_72
Type: TC
Location: 80298 - 81851 (+)
Gene ID: HRGMv2_0213_10_73
Type: pfam
Location: 81898 - 83001 (+)
Gene ID: HRGMv2_0213_10_74
Type: CAZyme
Location: 82976 - 84328 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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