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Cluster: HRGMv2_0213_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0213_10 HRGMv2_0213_10_45 50044 51930 + 2.A.9.3.2
pfam HRGMv2_0213_10 HRGMv2_0213_10_46 52072 52797 + Ala_racemase_N
CAZyme HRGMv2_0213_10 HRGMv2_0213_10_47 52947 54197 - GT19
pfam HRGMv2_0213_10 HRGMv2_0213_10_48 54262 55110 - SurE
pfam HRGMv2_0213_10 HRGMv2_0213_10_49 55325 56323 + Gp_dh_N | Gp_dh_C
CAZyme HRGMv2_0213_10 HRGMv2_0213_10_50 56505 57308 - GH25
pfam HRGMv2_0213_10 HRGMv2_0213_10_51 57317 58660 - Acyltransferase | GtrA_DPMS_TM | Acyltransf_2
TC HRGMv2_0213_10 HRGMv2_0213_10_52 58724 59452 - 4.F.1.2.2
Gene ID: HRGMv2_0213_10_45
Type: TC
Location: 50044 - 51930 (+)
Gene ID: HRGMv2_0213_10_46
Type: pfam
Location: 52072 - 52797 (+)
Gene ID: HRGMv2_0213_10_47
Type: CAZyme
Location: 52947 - 54197 (-)
Gene ID: HRGMv2_0213_10_48
Type: pfam
Location: 54262 - 55110 (-)
Gene ID: HRGMv2_0213_10_49
Type: pfam
Location: 55325 - 56323 (+)
Gene ID: HRGMv2_0213_10_50
Type: CAZyme
Location: 56505 - 57308 (-)
Gene ID: HRGMv2_0213_10_51
Type: pfam
Location: 57317 - 58660 (-)
Gene ID: HRGMv2_0213_10_52
Type: TC
Location: 58724 - 59452 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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