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Cluster: HRGMv2_0213_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0213_9 HRGMv2_0213_9_7 4459 6588 + GH148
TC HRGMv2_0213_9 HRGMv2_0213_9_8 6618 8117 + 1.B.14.6.2
NULL(UNKNOWN) HRGMv2_0213_9 HRGMv2_0213_9_9 8265 9065 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0213_9 HRGMv2_0213_9_10 9078 12269 + 1.B.14.6.1
pfam HRGMv2_0213_9 HRGMv2_0213_9_11 12274 14139 + SusD_RagB | SusD-like_3
pfam HRGMv2_0213_9 HRGMv2_0213_9_12 14145 14906 + adh_short | adh_short_C2
CAZyme HRGMv2_0213_9 HRGMv2_0213_9_13 14914 16404 + GH39
TC HRGMv2_0213_9 HRGMv2_0213_9_14 16434 17672 + 2.A.1.49.8
Gene ID: HRGMv2_0213_9_7
Type: CAZyme
Location: 4459 - 6588 (+)
Gene ID: HRGMv2_0213_9_8
Type: TC
Location: 6618 - 8117 (+)
Gene ID: HRGMv2_0213_9_9
Type:
Location: 8265 - 9065 (+)
Gene ID: HRGMv2_0213_9_10
Type: TC
Location: 9078 - 12269 (+)
Gene ID: HRGMv2_0213_9_11
Type: pfam
Location: 12274 - 14139 (+)
Gene ID: HRGMv2_0213_9_12
Type: pfam
Location: 14145 - 14906 (+)
Gene ID: HRGMv2_0213_9_13
Type: CAZyme
Location: 14914 - 16404 (+)
Gene ID: HRGMv2_0213_9_14
Type: TC
Location: 16434 - 17672 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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