Cluster: HRGMv2_0206_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0206
- CGC Family ID: CGCFAM_00459
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0206_1 | HRGMv2_0206_1_151 | 189950 | 193057 | - | 1.B.14.6.1 |
| TF | HRGMv2_0206_1 | HRGMv2_0206_1_152 | 193353 | 197348 | + | HTH_AraC |
| CAZyme | HRGMv2_0206_1 | HRGMv2_0206_1_153 | 197427 | 198809 | - | GH109 |
Gene ID: HRGMv2_0206_1_151
Type: TC
Location: 189950 - 193057 (-)
Type: TC
Location: 189950 - 193057 (-)
Gene ID: HRGMv2_0206_1_152
Type: TF
Location: 193353 - 197348 (+)
Type: TF
Location: 193353 - 197348 (+)
Gene ID: HRGMv2_0206_1_153
Type: CAZyme
Location: 197427 - 198809 (-)
Type: CAZyme
Location: 197427 - 198809 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Species
Alistipes avistercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.