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Cluster: HRGMv2_0206_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0206_20 HRGMv2_0206_20_13 16980 18164 + 2.A.6.1.13
TC HRGMv2_0206_20 HRGMv2_0206_20_14 18180 21284 + 2.A.6.1.5
pfam HRGMv2_0206_20 HRGMv2_0206_20_15 21289 22467 + OEP | OEP
CAZyme HRGMv2_0206_20 HRGMv2_0206_20_16 22575 25574 - GH92
NULL(UNKNOWN) HRGMv2_0206_20 HRGMv2_0206_20_17 25597 27717 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0206_20 HRGMv2_0206_20_18 27719 31156 - GH38
CAZyme HRGMv2_0206_20 HRGMv2_0206_20_19 31153 33387 - GH141
CAZyme HRGMv2_0206_20 HRGMv2_0206_20_20 33415 35724 - GH20
pfam HRGMv2_0206_20 HRGMv2_0206_20_21 35738 36898 - URO-D
CAZyme HRGMv2_0206_20 HRGMv2_0206_20_22 36888 39185 - GH139
TC HRGMv2_0206_20 HRGMv2_0206_20_23 39186 40814 - 8.A.46.1.6
TC HRGMv2_0206_20 HRGMv2_0206_20_24 40843 43854 - 1.B.14.6.1
Gene ID: HRGMv2_0206_20_13
Type: TC
Location: 16980 - 18164 (+)
Gene ID: HRGMv2_0206_20_14
Type: TC
Location: 18180 - 21284 (+)
Gene ID: HRGMv2_0206_20_15
Type: pfam
Location: 21289 - 22467 (+)
Gene ID: HRGMv2_0206_20_16
Type: CAZyme
Location: 22575 - 25574 (-)
Gene ID: HRGMv2_0206_20_17
Type:
Location: 25597 - 27717 (-)
Gene ID: HRGMv2_0206_20_18
Type: CAZyme
Location: 27719 - 31156 (-)
Gene ID: HRGMv2_0206_20_19
Type: CAZyme
Location: 31153 - 33387 (-)
Gene ID: HRGMv2_0206_20_20
Type: CAZyme
Location: 33415 - 35724 (-)
Gene ID: HRGMv2_0206_20_21
Type: pfam
Location: 35738 - 36898 (-)
Gene ID: HRGMv2_0206_20_22
Type: CAZyme
Location: 36888 - 39185 (-)
Gene ID: HRGMv2_0206_20_23
Type: TC
Location: 39186 - 40814 (-)
Gene ID: HRGMv2_0206_20_24
Type: TC
Location: 40843 - 43854 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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