dbCAN Logo

Cluster: HRGMv2_0206_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0206_1 HRGMv2_0206_1_139 169027 170415 - 2.A.2.3.4
CAZyme HRGMv2_0206_1 HRGMv2_0206_1_140 170412 171578 - GH130_1
TF HRGMv2_0206_1 HRGMv2_0206_1_141 171692 172579 - HTH_AraC
CAZyme HRGMv2_0206_1 HRGMv2_0206_1_142 172869 175181 + GH92
pfam HRGMv2_0206_1 HRGMv2_0206_1_143 175275 176126 - F_bP_aldolase
pfam HRGMv2_0206_1 HRGMv2_0206_1_144 176753 177298 - Pro_CA
CAZyme HRGMv2_0206_1 HRGMv2_0206_1_145 177428 179938 - GH2
CAZyme HRGMv2_0206_1 HRGMv2_0206_1_146 179946 182123 - GH92
CAZyme HRGMv2_0206_1 HRGMv2_0206_1_147 182136 183983 - GH35
Gene ID: HRGMv2_0206_1_139
Type: TC
Location: 169027 - 170415 (-)
Gene ID: HRGMv2_0206_1_140
Type: CAZyme
Location: 170412 - 171578 (-)
Gene ID: HRGMv2_0206_1_141
Type: TF
Location: 171692 - 172579 (-)
Gene ID: HRGMv2_0206_1_142
Type: CAZyme
Location: 172869 - 175181 (+)
Gene ID: HRGMv2_0206_1_143
Type: pfam
Location: 175275 - 176126 (-)
Gene ID: HRGMv2_0206_1_144
Type: pfam
Location: 176753 - 177298 (-)
Gene ID: HRGMv2_0206_1_145
Type: CAZyme
Location: 177428 - 179938 (-)
Gene ID: HRGMv2_0206_1_146
Type: CAZyme
Location: 179946 - 182123 (-)
Gene ID: HRGMv2_0206_1_147
Type: CAZyme
Location: 182136 - 183983 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List