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Cluster: HRGMv2_0206_CGC29

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0206_19 HRGMv2_0206_19_9 12364 13401 - GT9
pfam HRGMv2_0206_19 HRGMv2_0206_19_10 13388 13990 - DUF4254
CAZyme HRGMv2_0206_19 HRGMv2_0206_19_11 14069 15070 + GH73
NULL(UNKNOWN) HRGMv2_0206_19 HRGMv2_0206_19_12 15089 15775 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0206_19 HRGMv2_0206_19_13 15750 17927 + 8.A.51.1.1
TC HRGMv2_0206_19 HRGMv2_0206_19_14 18034 19434 - 3.D.1.2.1
TC HRGMv2_0206_19 HRGMv2_0206_19_15 19469 20953 - 3.D.1.2.1
TC HRGMv2_0206_19 HRGMv2_0206_19_16 20969 22864 - 3.D.9.1.1
TC HRGMv2_0206_19 HRGMv2_0206_19_17 22890 23198 - 3.D.1.2.1
TC HRGMv2_0206_19 HRGMv2_0206_19_18 23214 23723 - 3.D.9.1.1
STP HRGMv2_0206_19 HRGMv2_0206_19_19 23727 24167 - Fer4 | Fer4
TC HRGMv2_0206_19 HRGMv2_0206_19_20 24170 25246 - 3.D.1.5.1
TC HRGMv2_0206_19 HRGMv2_0206_19_21 25264 26883 - 3.D.1.5.1
TC HRGMv2_0206_19 HRGMv2_0206_19_22 26880 27533 - 3.D.1.3.1
TC HRGMv2_0206_19 HRGMv2_0206_19_23 27524 27874 - 3.D.1.8.1
Gene ID: HRGMv2_0206_19_9
Type: CAZyme
Location: 12364 - 13401 (-)
Gene ID: HRGMv2_0206_19_10
Type: pfam
Location: 13388 - 13990 (-)
Gene ID: HRGMv2_0206_19_11
Type: CAZyme
Location: 14069 - 15070 (+)
Gene ID: HRGMv2_0206_19_12
Type:
Location: 15089 - 15775 (+)
Gene ID: HRGMv2_0206_19_13
Type: TC
Location: 15750 - 17927 (+)
Gene ID: HRGMv2_0206_19_14
Type: TC
Location: 18034 - 19434 (-)
Gene ID: HRGMv2_0206_19_15
Type: TC
Location: 19469 - 20953 (-)
Gene ID: HRGMv2_0206_19_16
Type: TC
Location: 20969 - 22864 (-)
Gene ID: HRGMv2_0206_19_17
Type: TC
Location: 22890 - 23198 (-)
Gene ID: HRGMv2_0206_19_18
Type: TC
Location: 23214 - 23723 (-)
Gene ID: HRGMv2_0206_19_19
Type: STP
Location: 23727 - 24167 (-)
Gene ID: HRGMv2_0206_19_20
Type: TC
Location: 24170 - 25246 (-)
Gene ID: HRGMv2_0206_19_21
Type: TC
Location: 25264 - 26883 (-)
Gene ID: HRGMv2_0206_19_22
Type: TC
Location: 26880 - 27533 (-)
Gene ID: HRGMv2_0206_19_23
Type: TC
Location: 27524 - 27874 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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