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Cluster: HRGMv2_0206_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0206_17 HRGMv2_0206_17_8 8763 10232 - GH16_3
CAZyme HRGMv2_0206_17 HRGMv2_0206_17_9 10262 11125 - GH16_3
pfam HRGMv2_0206_17 HRGMv2_0206_17_10 11205 12212 - fn3
TC HRGMv2_0206_17 HRGMv2_0206_17_11 12264 13805 - 8.A.46.1.3
TC HRGMv2_0206_17 HRGMv2_0206_17_12 13817 16939 - 1.B.14.6.1
CAZyme HRGMv2_0206_17 HRGMv2_0206_17_13 16950 19211 - GH3
pfam HRGMv2_0206_17 HRGMv2_0206_17_14 19443 21155 - DUF6377
CAZyme HRGMv2_0206_17 HRGMv2_0206_17_15 21853 23727 - GH20
CAZyme HRGMv2_0206_17 HRGMv2_0206_17_16 23811 25625 + GT83
pfam HRGMv2_0206_17 HRGMv2_0206_17_17 25622 25990 + GtrA_DPMS_TM
CAZyme HRGMv2_0206_17 HRGMv2_0206_17_18 26113 26841 - GT2
Gene ID: HRGMv2_0206_17_8
Type: CAZyme
Location: 8763 - 10232 (-)
Gene ID: HRGMv2_0206_17_9
Type: CAZyme
Location: 10262 - 11125 (-)
Gene ID: HRGMv2_0206_17_10
Type: pfam
Location: 11205 - 12212 (-)
Gene ID: HRGMv2_0206_17_11
Type: TC
Location: 12264 - 13805 (-)
Gene ID: HRGMv2_0206_17_12
Type: TC
Location: 13817 - 16939 (-)
Gene ID: HRGMv2_0206_17_13
Type: CAZyme
Location: 16950 - 19211 (-)
Gene ID: HRGMv2_0206_17_14
Type: pfam
Location: 19443 - 21155 (-)
Gene ID: HRGMv2_0206_17_15
Type: CAZyme
Location: 21853 - 23727 (-)
Gene ID: HRGMv2_0206_17_16
Type: CAZyme
Location: 23811 - 25625 (+)
Gene ID: HRGMv2_0206_17_17
Type: pfam
Location: 25622 - 25990 (+)
Gene ID: HRGMv2_0206_17_18
Type: CAZyme
Location: 26113 - 26841 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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