dbCAN Logo

Cluster: HRGMv2_0206_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0206_16 HRGMv2_0206_16_21 22714 24909 - GH97
CAZyme HRGMv2_0206_16 HRGMv2_0206_16_22 24925 26820 - GH13_46
CAZyme HRGMv2_0206_16 HRGMv2_0206_16_23 26894 28234 - GH13
CAZyme HRGMv2_0206_16 HRGMv2_0206_16_24 28248 30557 - GH13_36
pfam HRGMv2_0206_16 HRGMv2_0206_16_25 30658 32454 - SusE
TC HRGMv2_0206_16 HRGMv2_0206_16_26 32474 34138 - 8.A.46.1.1
TC HRGMv2_0206_16 HRGMv2_0206_16_27 34154 37177 - 1.B.14.6.1
TC HRGMv2_0206_16 HRGMv2_0206_16_28 37240 38550 - 2.A.2.6.2
TC HRGMv2_0206_16 HRGMv2_0206_16_29 38756 40135 + 8.A.59.2.1
TF HRGMv2_0206_16 HRGMv2_0206_16_30 40146 40898 + LytTR
CAZyme HRGMv2_0206_16 HRGMv2_0206_16_31 40990 43602 - GH77
TC HRGMv2_0206_16 HRGMv2_0206_16_32 44472 47777 + 1.B.14.6.2
Gene ID: HRGMv2_0206_16_21
Type: CAZyme
Location: 22714 - 24909 (-)
Gene ID: HRGMv2_0206_16_22
Type: CAZyme
Location: 24925 - 26820 (-)
Gene ID: HRGMv2_0206_16_23
Type: CAZyme
Location: 26894 - 28234 (-)
Gene ID: HRGMv2_0206_16_24
Type: CAZyme
Location: 28248 - 30557 (-)
Gene ID: HRGMv2_0206_16_25
Type: pfam
Location: 30658 - 32454 (-)
Gene ID: HRGMv2_0206_16_26
Type: TC
Location: 32474 - 34138 (-)
Gene ID: HRGMv2_0206_16_27
Type: TC
Location: 34154 - 37177 (-)
Gene ID: HRGMv2_0206_16_28
Type: TC
Location: 37240 - 38550 (-)
Gene ID: HRGMv2_0206_16_29
Type: TC
Location: 38756 - 40135 (+)
Gene ID: HRGMv2_0206_16_30
Type: TF
Location: 40146 - 40898 (+)
Gene ID: HRGMv2_0206_16_31
Type: CAZyme
Location: 40990 - 43602 (-)
Gene ID: HRGMv2_0206_16_32
Type: TC
Location: 44472 - 47777 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List