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Cluster: HRGMv2_0206_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0206_4 HRGMv2_0206_4_26 38448 40436 + 3.D.1.9.1
TC HRGMv2_0206_4 HRGMv2_0206_4_27 40441 41355 + 3.D.1.9.3
NULL(UNKNOWN) HRGMv2_0206_4 HRGMv2_0206_4_28 41352 41981 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0206_4 HRGMv2_0206_4_29 41986 43386 + 3.D.1.9.1
TC HRGMv2_0206_4 HRGMv2_0206_4_30 43383 44909 + 3.D.1.9.3
TC HRGMv2_0206_4 HRGMv2_0206_4_31 44952 45725 + 3.D.1.4.1
TC HRGMv2_0206_4 HRGMv2_0206_4_32 45733 46287 + 2.A.51.1.6
TC HRGMv2_0206_4 HRGMv2_0206_4_33 46284 46853 + 2.A.51.1.5
NULL(UNKNOWN) HRGMv2_0206_4 HRGMv2_0206_4_34 46860 47150 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0206_4 HRGMv2_0206_4_35 47241 48125 - Cons_hypoth95 | Methyltrans_SAM
CAZyme HRGMv2_0206_4 HRGMv2_0206_4_36 48134 51199 - GH2
Gene ID: HRGMv2_0206_4_26
Type: TC
Location: 38448 - 40436 (+)
Gene ID: HRGMv2_0206_4_27
Type: TC
Location: 40441 - 41355 (+)
Gene ID: HRGMv2_0206_4_28
Type:
Location: 41352 - 41981 (+)
Gene ID: HRGMv2_0206_4_29
Type: TC
Location: 41986 - 43386 (+)
Gene ID: HRGMv2_0206_4_30
Type: TC
Location: 43383 - 44909 (+)
Gene ID: HRGMv2_0206_4_31
Type: TC
Location: 44952 - 45725 (+)
Gene ID: HRGMv2_0206_4_32
Type: TC
Location: 45733 - 46287 (+)
Gene ID: HRGMv2_0206_4_33
Type: TC
Location: 46284 - 46853 (+)
Gene ID: HRGMv2_0206_4_34
Type:
Location: 46860 - 47150 (-)
Gene ID: HRGMv2_0206_4_35
Type: pfam
Location: 47241 - 48125 (-)
Gene ID: HRGMv2_0206_4_36
Type: CAZyme
Location: 48134 - 51199 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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