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Cluster: HRGMv2_0203_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0203_5 HRGMv2_0203_5_7 8834 11953 - 1.B.14.6.1
pfam HRGMv2_0203_5 HRGMv2_0203_5_8 11965 13449 - NHL | TIG
NULL(UNKNOWN) HRGMv2_0203_5 HRGMv2_0203_5_9 13493 14506 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0203_5 HRGMv2_0203_5_10 14651 17476 - GH2
pfam HRGMv2_0203_5 HRGMv2_0203_5_11 17531 20896 - TPR_6 | TPR_8 | TPR_8 | TPR_16 | DUF5107
sulfatase HRGMv2_0203_5 HRGMv2_0203_5_12 21010 21711 - S1_8
TC HRGMv2_0203_5 HRGMv2_0203_5_13 21863 23251 - 2.A.1.1.55
CAZyme HRGMv2_0203_5 HRGMv2_0203_5_14 23303 26089 - GH2
Gene ID: HRGMv2_0203_5_7
Type: TC
Location: 8834 - 11953 (-)
Gene ID: HRGMv2_0203_5_8
Type: pfam
Location: 11965 - 13449 (-)
Gene ID: HRGMv2_0203_5_9
Type:
Location: 13493 - 14506 (-)
Gene ID: HRGMv2_0203_5_10
Type: CAZyme
Location: 14651 - 17476 (-)
Gene ID: HRGMv2_0203_5_11
Type: pfam
Location: 17531 - 20896 (-)
Gene ID: HRGMv2_0203_5_12
Type: sulfatase
Location: 21010 - 21711 (-)
Gene ID: HRGMv2_0203_5_13
Type: TC
Location: 21863 - 23251 (-)
Gene ID: HRGMv2_0203_5_14
Type: CAZyme
Location: 23303 - 26089 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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