Cluster: HRGMv2_0203_CGC38
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0203
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0203_107 | HRGMv2_0203_107_1 | 61 | 2250 | - | 3.A.7.16.1 |
| TC | HRGMv2_0203_107 | HRGMv2_0203_107_2 | 2508 | 3545 | + | 1.A.35.3.2 |
| STP | HRGMv2_0203_107 | HRGMv2_0203_107_3 | 3552 | 4199 | + | HhH-GPD |
| CAZyme | HRGMv2_0203_107 | HRGMv2_0203_107_4 | 4249 | 5442 | + | CE1 |
Gene ID: HRGMv2_0203_107_1
Type: TC
Location: 61 - 2250 (-)
Type: TC
Location: 61 - 2250 (-)
Gene ID: HRGMv2_0203_107_2
Type: TC
Location: 2508 - 3545 (+)
Type: TC
Location: 2508 - 3545 (+)
Gene ID: HRGMv2_0203_107_3
Type: STP
Location: 3552 - 4199 (+)
Type: STP
Location: 3552 - 4199 (+)
Gene ID: HRGMv2_0203_107_4
Type: CAZyme
Location: 4249 - 5442 (+)
Type: CAZyme
Location: 4249 - 5442 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Species
Phocaeicola sp900544075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.