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Cluster: HRGMv2_0203_CGC36

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0203_89 HRGMv2_0203_89_3 1152 2504 + 2.A.66.1.32
TC HRGMv2_0203_89 HRGMv2_0203_89_4 2569 3198 + 2.A.115.2.14
sulfatase HRGMv2_0203_89 HRGMv2_0203_89_5 3333 4121 - S1_33
sulfatase HRGMv2_0203_89 HRGMv2_0203_89_6 4142 5494 - S1_9
CAZyme HRGMv2_0203_89 HRGMv2_0203_89_7 5602 7167 - PL29
sulfatase HRGMv2_0203_89 HRGMv2_0203_89_8 7171 8721 - S1_27
CAZyme HRGMv2_0203_89 HRGMv2_0203_89_9 8926 10410 - PL6
CAZyme HRGMv2_0203_89 HRGMv2_0203_89_10 10562 11800 + PL6
Gene ID: HRGMv2_0203_89_3
Type: TC
Location: 1152 - 2504 (+)
Gene ID: HRGMv2_0203_89_4
Type: TC
Location: 2569 - 3198 (+)
Gene ID: HRGMv2_0203_89_5
Type: sulfatase
Location: 3333 - 4121 (-)
Gene ID: HRGMv2_0203_89_6
Type: sulfatase
Location: 4142 - 5494 (-)
Gene ID: HRGMv2_0203_89_7
Type: CAZyme
Location: 5602 - 7167 (-)
Gene ID: HRGMv2_0203_89_8
Type: sulfatase
Location: 7171 - 8721 (-)
Gene ID: HRGMv2_0203_89_9
Type: CAZyme
Location: 8926 - 10410 (-)
Gene ID: HRGMv2_0203_89_10
Type: CAZyme
Location: 10562 - 11800 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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