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Cluster: HRGMv2_0203_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0203_41 HRGMv2_0203_41_2 383 2563 - GH97
CAZyme HRGMv2_0203_41 HRGMv2_0203_41_3 2753 4213 - GH13_46
TC HRGMv2_0203_41 HRGMv2_0203_41_4 4461 7532 + 1.B.14.6.1
TC HRGMv2_0203_41 HRGMv2_0203_41_5 7544 9187 + 8.A.46.1.1
pfam HRGMv2_0203_41 HRGMv2_0203_41_6 9208 11052 + SusE | SusE
CAZyme HRGMv2_0203_41 HRGMv2_0203_41_7 11077 13548 + GH13_10
CAZyme HRGMv2_0203_41 HRGMv2_0203_41_8 13653 15614 + GH13_14
Gene ID: HRGMv2_0203_41_2
Type: CAZyme
Location: 383 - 2563 (-)
Gene ID: HRGMv2_0203_41_3
Type: CAZyme
Location: 2753 - 4213 (-)
Gene ID: HRGMv2_0203_41_4
Type: TC
Location: 4461 - 7532 (+)
Gene ID: HRGMv2_0203_41_5
Type: TC
Location: 7544 - 9187 (+)
Gene ID: HRGMv2_0203_41_6
Type: pfam
Location: 9208 - 11052 (+)
Gene ID: HRGMv2_0203_41_7
Type: CAZyme
Location: 11077 - 13548 (+)
Gene ID: HRGMv2_0203_41_8
Type: CAZyme
Location: 13653 - 15614 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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